Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq975 104 9e-18 >seq975 Length=6668 Score = 104 bits (114), Expect = 9e-18 Identities = 188/273 (69%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064 ||||||||||||| ||||| ||||| || | ||||| | || | | | | | Sbjct 5363 CCATGCACATGTGCGTCGCCTCGATGACGACGGCCACGCCTTGGGGCTGGATGACGCCCA 5422 Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCG--GCGAGCATA 31122 | |||| ||||||||| | || || || |||||||||||||| || ||||| | | Sbjct 5423 TGATCGCGTTCGCGATCTGCTTCGTCAGTCGCTCCTGCACTTGCAGTCGTCGCGAGAAGA 5482 Query 31123 CATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCT 31182 | || | | ||| | ||||||||||| || | | |||||||| ||||||| Sbjct 5483 C--CTCTGAGATGCGCGCGAGCTTGCTCAGACCGAGCACCTTGCCGTTCGGGATGTAGCC 5540 Query 31183 GATCGTGACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGAT 31242 || |||| |||||| || |||| | | |||||||||||| | ||||| | || Sbjct 5541 AATGTGGACCTTGCCGATGAACGGCACCATGTGATGCTCGCACAGCGAGTACAGATCAAT 5600 Query 31243 GTCGCGCACCGTCACCATCTGGTCATGCTTCTC 31275 |||||| || | ||||||| ||| || | ||| Sbjct 5601 GTCGCGGACGATGACCATCTCGTCGTGGTCCTC 5633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187239425116160