Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1079 132 1e-25 seq5064 123 6e-23 >seq1079 Length=6315 Score = 132 bits (146), Expect = 1e-25 Identities = 162/220 (74%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || || || ||||| || ||||||||||| || | | || | || || Sbjct 989 GAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTC 930 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | |||||| |||| | |||||| ||||| || Sbjct 929 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTC 870 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || || |||||| | || | |||||| ||| ||| || || || || || || Sbjct 869 CTGGATCTTCTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGT 810 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT-TTTACC 152110 ||||| || |||||||| ||||||| |||||| |||||| Sbjct 809 CTTGCCGGTCAGAGTCTTGACGAAGATCTGCATCTTTACC 770 >seq5064 Length=2045 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 151905 AGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTC 151964 || || ||||| || ||||||||||| || | | || | || || || || || Sbjct 3 AGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTG 62 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 ||||||||||| || | |||||| |||| | |||||| ||||| || || || || || Sbjct 63 CCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGC 122 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 |||||| | || | ||| || || ||| || || || || || || || |||||||| Sbjct 123 TTGACATTGTCAATGCTATCCGAGGGCTCGACGTCCAGGGTGATCGTCTTCCCCGTGAGG 182 Query 152085 GTCTTCACGAAGACCTGCATTTT 152107 ||||||||||||| ||||||||| Sbjct 183 GTCTTCACGAAGATCTGCATTTT 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153487288097760