Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950895.1_202016-12-27] 22,560 sequences; 37,673,126 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq5064 143 2e-29 seq1079 138 8e-28 >seq5064 Length=2045 Score = 143 bits (158), Expect = 2e-29 Identities = 154/202 (76%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 44138 AGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTC 44197 ||||| |||||| ||||||||||| || | || ||| |||| || |||||||| Sbjct 3 AGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTGCTTG 62 Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||| ||||||| ||||||||||| | ||| | || ||||| ||| ||||||||| Sbjct 63 CCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGC 122 Query 44258 TT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315 || || ||| | ||| | || | || || || |||| || |||||||| ||||||| Sbjct 123 TTGACATTGT--CAATGCTATCCGAGGGCTCGACGTCCAGGGTGATCGTCTTCCCCGTGA 180 Query 44316 GGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||||| ||||| Sbjct 181 GGGTCTTCACGAAGATCTGCAT 202 >seq1079 Length=6315 Score = 138 bits (152), Expect = 8e-28 Identities = 159/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| ||||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 986 CACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 927 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| ||||||||||| | ||| | || ||||| ||| Sbjct 926 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTG 867 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||||||||| || ||| | ||| |||| | | || || || | ||| |||||| Sbjct 866 GATCTTCTGCTTGACATTGT--CAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTC 809 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||||| |||||||| ||||| Sbjct 808 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359891420639520