Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq875 194 2e-44 >seq875 Length=8764 Score = 194 bits (214), Expect = 2e-44 Identities = 371/536 (69%), Gaps = 8/536 (1%) Strand=Plus/Plus Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCAC 145694 |||| | ||| | || || | ||| ||| | | | ||||| | ||| || || ||||| Sbjct 6549 GATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCAC 6608 Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG-AGGC 145753 ||||| | ||||| |||||| || || | |||||||||||| || || || || | Sbjct 6609 ATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCC-AGCACGCAGCC 6667 Query 145754 CCGTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 | |||| || |||| | || | |||| ||| | ||||| || ||||| || ||||| Sbjct 6668 CTGTGACCTGCGCGATGA-GTCGAGTCAACAGCGCATAGCTCGCAATGTTAAAAGGCACG 6726 Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 || || |||||||| | ||||||||||||| |||||| |||||||| ||| || ||| Sbjct 6727 CCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGGCACGAGAGCTCGCCGTTGGCGACG 6786 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||||||| | | ||| || |||||||| ||||| | |||||||| |||||| Sbjct 6787 TAGAACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTC 6846 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTC 145991 || || | | || || | | | || | |||||| |||||| || || | || Sbjct 6847 CATGCCGACATGATGATGCGAC-GATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTC 6905 Query 145992 CCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCC 146050 | |||||||| || ||||| ||| ||| || | | || | | | |||| ||| | Sbjct 6906 CGCTAGCTGGTCGACTCCCTGGCCCGAGTAGTC-GGCGTGCATGGTCGTGTACTTGGCAC 6964 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCA 146110 | ||||| | ||||||||| || || || || || || || || | || | || || | Sbjct 6965 CAAAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCGA 7024 Query 146111 GCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCC 146166 | ||| | | ||| | ||| ||| || ||| | ||||| || | || |||| Sbjct 7025 GACCGATGCTTTCCAGGTATTCCTTGGATCCATTGCCATCCCAAATGTGGATGCCC 7080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589969288007040