Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq875 109 4e-19 >seq875 Length=8764 Score = 109 bits (120), Expect = 4e-19 Identities = 188/273 (69%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 96999 CTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTG 97058 ||| || || ||||||| || || || || ||||| | | || | || | || Sbjct 6552 CTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCACATG 6611 Query 97059 ATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGT 97118 |||| || ||||| ||||| || | ||||| || || ||||||| | | | || Sbjct 6612 GTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGT 6671 Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178 ||| || ||||| | | ||| || || | |||||| ||||||||||||||||| || || Sbjct 6672 GACCTGCGCGATGAGTCGAGTCAACAGCGCATAGCTCGCAATGTTAAAAGGCACGCCGAG 6731 Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAA 97238 |||||| |||||||| | || || | ||| || || |||| || | || || || Sbjct 6732 TCCCATGTCAGCTGAGCGCTGGTACATCTGGCACGAGAGCTCGCCGTTGGCGACGTAGAA 6791 Query 97239 CTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 ||| | || | ||||| || |||| |||||| Sbjct 6792 CTGGCAGAACATGTGACACGGCGGCAGCGCCAT 6824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346722395556320