Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq422 152 4e-32 seq170 127 2e-24 >seq422 Length=12968 Score = 152 bits (168), Expect = 4e-32 Identities = 303/446 (68%), Gaps = 2/446 (0%) Strand=Plus/Plus Query 132924 TAATACATGCCCGTTTTCAGTTTTTTCTCCCACGCGTAAAAGTGTATGCTCGACACCACC 132983 || ||||| ||||| || || |||| ||||||||| ||||| ||| || || | Sbjct 4 TAGTACATACCCGTCTTGAGACCCTTCTTCCACGCGTAGAAGTGCATGGACGTCAGCTTG 63 Query 132984 GAGTAAGTGGGTTCGGCGACAAATAAATTCAGCGATTGACTCTGATCTATGAAAGGAGCA 133043 | || || || |||| | ||| ||||| || ||||| ||| | | | Sbjct 64 CTGATCGTCGGCTCCGCGATGTGCACATTGAGCGACTGGCTCTGGCAGATGTAGGCGCCG 123 Query 133044 CGGTCGGCGGCCATGTTTATTATACACTTTGATTTGATCTCCCATGCCGTCTTGAAGAGA 133103 |||||||||||||||| | | ||| ||||||||||| |||||||| | Sbjct 124 CGGTCGGCGGCCATGTCGAGCACGGCCTTCTGCTTGATCTCCCACACCGTCTTGTACTTC 183 Query 133104 TTCTTGACATGCTGTGGTATTTCGTCAATGTTCTGCACGGACCCGTTTTCGGCCAAAATC 133163 | ||| || | || || | | ||||||||| || |||| ||| || ||| Sbjct 184 TCCTTCACGGCATCCGGGATCACACGCACGTTCTGCACTGAGCCGTGGTCGTGCAGGATC 243 Query 133164 TTGTTGCGCAATTCCGGAGTGTAAATGTCGAGATCGATTAGCGCTTTGACGAGATACTGG 133223 | |||||||| || || || | ||| |||| ||||| ||| | || | || |||| | Sbjct 244 TGGTTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATCAGGTACTTG 303 Query 133224 TTGACCA-CTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAACGG 133282 || || | | |||| |||||| || || ||||| | | || | || | ||||||||| Sbjct 304 TTCACGATCGTGAA-CTCGCCTGCAAGCACGCGGCGGTTGTACATGTTGGTCGTGAACGG 362 Query 133283 TTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCCAC 133342 |||| || |||||||||||||| |||||||| |||| |||||| ||||| ||| | Sbjct 363 CTCGATCGACTCGTTGTTGCCGAGGATCTGCGCGGTCGACGCCGTCGGCATCGGCGCGAG 422 Query 133343 CAACAAAGAGTTTCTTACGCCGTACT 133368 || || ||||| | |||||||||| Sbjct 423 CAGCAGCGAGTTGCGCACGCCGTACT 448 >seq170 Length=18893 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||||| || || |||||||| || | ||||| ||||| Sbjct 6667 CACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 6608 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || || ||| |||| || ||||||||||| ||||| || ||||||||||| Sbjct 6607 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTG 6548 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || || | || | | |||||| |||||| |||| || | ||| || Sbjct 6547 GATCTTCTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTT 6488 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||||||| || || || |||||||| Sbjct 6487 GCCGGTCAGAGTCTTGACGAAGATCTGCAT 6458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433753332198592