Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2106 114 9e-21 seq1178 84.2 2e-11 >seq2106 Length=4523 Score = 114 bits (126), Expect = 9e-21 Identities = 119/151 (79%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 33571 CCAGAGATGGGCGACAAGTTT-GCA-TCGTTCACGGCCCAGAAGGGCACGTGCGGCATGA 33628 || ||||| ||||||||||| ||| ||| ||||||| |||||||| |||||||| || Sbjct 3352 CCCGAGATCGGCGACAAGTTCAGCAGTCGC-CACGGCC-AGAAGGGCGTGTGCGGCACGA 3409 Query 33629 TGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCA 33688 | | ||||| |||||||||||||| | |||||||||| ||||||||| |||| | Sbjct 3410 TCCGCAACCAGGAGGACATGCCGTTCAACGACGACGGCGTGTGCCCGGACCTGATCATGA 3469 Query 33689 ACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 ||||||| | ||||| ||||||||||| Sbjct 3470 ACCCGCACGGTTTCCCGAGCCGCATGACGGT 3500 >seq1178 Length=7138 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 33556 CGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGG 33614 ||||| || || || || |||| |||||||||||||| ||| |||||| |||||||| Sbjct 4152 CGCAACATTCGTATTCCGCAGATCGGCGACAAGTTTGCGTCGCGTCACGG-ACAGAAGGG 4210 Query 33615 CACGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCC 33674 ||| ||| |||| ||| ||| ||||||||||||||| ||| ||| | || Sbjct 4211 TACGATCGGTATGACGTATCGCCAAGAAGACATGCCGTTCACGATCGAGGGCATCACGCC 4270 Query 33675 GGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 || | | | |||||||| || | || ||||| |||||||| Sbjct 4271 CGATATCATTGTGAACCCGCACGCTATTCCGTCGCGTATGACGGT 4315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356170316882128