Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq756 159 5e-34 seq875 143 4e-29 seq422 111 2e-19 >seq756 Length=9614 Score = 159 bits (176), Expect = 5e-34 Identities = 572/872 (66%), Gaps = 58/872 (7%) Strand=Plus/Minus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCT-GTC 125080 ||| | |||||||| |||||| |||| ||| ||||||| |||||| |||| || || Sbjct 2969 TGGCAGATGTACAAGAAGGCTGAGGCGAGCTTCTGGACGGCTGAAGAGATCGACCTCGTG 2910 Query 125081 CAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCA 125140 || | |||| | || ||| | | | | || || | ||||| | ||||| ||| Sbjct 2909 CACG-ACCTCAAGGACTGGAACAACC---TCACGGACAACGAGCGCTACTTTATCAAGCA 2854 Query 125141 CATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT---GTTGACACG 125197 | | | || ||||| || | | ||||| ||||||||||| || || | ||| || Sbjct 2853 CGTGCTCGCGTTCTTCGCGGCCAGTGATGGCATCGTCAACGAGAACCTCGCGATGA-AC- 2796 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||| ||| || |||| |||| | ||||| ||||| ||||| || ||| Sbjct 2795 -TTCAGCAGCGAGGTGCAGGTTCCTGAGGCGCGTTGCTTCTACGGCTTCCAGATTGCGAT 2737 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCA 125317 ||||||| | |||||||| ||||||| || || |||| |||||| || | | | Sbjct 2736 TGAGAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACCAG-A 2678 Query 125318 ACGTAAA----CACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 || || ||| | ||| ||| ||||| ||| | || | | | | || |||| Sbjct 2677 CCGAGAAGAACCACCTTCTCCG---CGCCATCGAGACGATCCCTTGTGTGCAGAAGAAGG 2621 Query 125374 CTCAATGGGTGATTCGGTGGATCGA-TGACGACAAGTCTTCGTACGCCGACAGACTGGTG 125432 | || |||| | | |||| ||| | || | | | ||| |||||| | | || Sbjct 2620 CCCACTGGGCGCTCAAGTGGTGCGACTCGCGCCGCGCCG-CGTTCGCCGAGCGTATCGTC 2562 Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGCGGCCATCTTTTGGCT 125491 || ||||| ||||| |||||||||||||| ||||| | ||| ||| | ||||| ||||| Sbjct 2561 GCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCTGCT-CTATCTTCTGGCT 2503 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 |||||||||||| || ||||| || || | | |||||| | || || || ||||| Sbjct 2502 CAAGAAGCGCGGCCTTATGCCTGGCCTCAGCTTCTCGAACGAGCTCATCTCGCGTGACGA 2443 Query 125552 GGGCCTACACTGTGACTTTGCCATTCTACTGT--------TTCG-CAACTATCTGCGTCC 125602 ||| || ||||| ||||| || || |||| ||| |||| | || || Sbjct 2442 GGGTCTCCACTGCGACTTCGCGTGCCTGCTGTACTCCAAGCTCGCCAACAA---GCTCCC 2386 Query 125603 CGAGT-GCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAG 125661 ||||| | ||||| || || |||| | | |||||| || ||| | Sbjct 2385 CGAGTCTCGCATCCA-CG------AGATCAT-----TCG----CGATGCTGTCGCGATCG 2342 Query 125662 AACAAGAGTTTCTAACCGAATCCCTACCGGT-CAGCATGATTGGCATGAACTGCAAGCTA 125720 | | ||||| | || || || ||||| ||| | || || ||||||| || Sbjct 2341 AGAAGGAGTTCGTCCAGGACTCGCTCCCGGTGGAGC-TCATCGGTATGAACTCGTCTCTC 2283 Query 125721 ATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAG--TTGATTGGCCGCA 125778 |||||| ||||||| ||||| || ||||| || || ||| | | | | || || Sbjct 2282 ATGTGCCAGTACATTGAGTTCTGCGCCGATCGCCTCCTCCACGCGCTTGGCGTTGC--CA 2225 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 |||| ||||| | ||| || || || | ||| || || || || |||| |||| Sbjct 2224 AGATCTACAAGGTGTCGAACCCGTTCGACTGGATGGACATGATCTCGCTCCAGGGCAAGA 2165 Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 ||||||| ||||||||| || |||||||| Sbjct 2164 CCAACTTCTTCGAGAAGCGCGTGGGCGAGTAC 2133 >seq875 Length=8764 Score = 143 bits (158), Expect = 4e-29 Identities = 296/429 (69%), Gaps = 10/429 (2%) Strand=Plus/Minus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 |||||||| || |||||||| || ||||||||| | |||| || ||||||| ||| Sbjct 7007 GGCGATCTCGGACCAGTGTATGGCTTCCAGTGGCGCCACTTTGGTGCCAAGTACAC-GAC 6949 Query 70127 --TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACACT 70183 ||| | | ||||| ||||| ||||| || || || | || || ||||| ||| Sbjct 6948 CATGCACGCC-GACTACTCGGGCCAGGGAGTCGACCAGCTAGCGGAGG-TCATTCACAAG 6891 Query 70184 CTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTG 70243 |||||||| || |||| ||| | | ||| | |||| ||||||| ||||| || | Sbjct 6890 CTCAAGACGAACCCAAACGATCGTCGCATCATCATGTCGGCATGGAACCCTGCGGACCTC 6831 Query 70244 CACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTAC-TCGTACGATGGCA 70301 | | ||||| || || ||||||||| |||| || ||||| ||| ||| | | ||| Sbjct 6830 AAGGAGATGGCGCTGCCGCCGTGTCACATGTTCTGC-CAGTTCTACGTCGC-CAACGGCG 6773 Query 70302 AATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACA 70361 | | || ||| ||||| ||| | || |||||||| ||||| || || ||||||| Sbjct 6772 AGCTCTCGTGCCAGATGTACCAGCGCTCAGCTGACATGGGACTCGGCGTGCCTTTTAACA 6713 Query 70362 TTGCAAGCTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACG 70421 |||| |||||| | ||||||| | | || || || | || || ||| || | Sbjct 6712 TTGCGAGCTATGCGCTGTTGACTCGACTCATCGCGCAGGTCACAGGGCTGCGTGCTGGAG 6653 Query 70422 AGTTCGTACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481 | ||| | ||||| || ||||| || ||| | || || || || | || || | |||| Sbjct 6652 ACTTCATCCACACGATCGGCGATGCGCACATCTACTTGAACCATGTGGAACCGCTTAAGG 6593 Query 70482 TGCAACTCG 70490 | || |||| Sbjct 6592 TTCAGCTCG 6584 >seq422 Length=12968 Score = 111 bits (122), Expect = 2e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099 |||||||| || |||||||| | ||| | || |||| ||||| |||||| | || Sbjct 179 TACAAGACGGTGTGGGAGATCAAGCAGAAGGCCGTGCTCGACATGGCCGCCGACCGCGGC 120 Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159 | |||||| |||||| || ||| ||||| || || | || ||||| || ||| Sbjct 119 GCCTACATCTGCCAGAGCCAGTCGCTCAATGTGCACATCGCGGAGCCGACGATCAGCAAG 60 Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCT 98218 |||| || || ||||| ||||| ||||| ||||| ||||||||||| |||||||| || Sbjct 59 CTGACGTCCATGCACTTCTACGCGTGGAAGAAGGGTCTCAAGACGGGTATGTACTACCT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740924179013760