Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq875 136 3e-27 >seq875 Length=8764 Score = 136 bits (150), Expect = 3e-27 Identities = 443/680 (65%), Gaps = 20/680 (3%) Strand=Plus/Plus Query 25286 CATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTT 25345 |||| |||| | || | | |||||| | |||||| ||||| ||| ||||| Sbjct 6456 CATCGCCATCTTGATCGTGCCATGAGGCTTGTAACCTTCCAGCTCGAAGTCCTCGAAGAC 6515 Query 25346 AAAGTCGTCCAGGCTCTCCACCCTC-CTG--TTTATCCTCAGTGT-GGGAAAGGGTCTGG 25401 ||| || || | ||| | | || ||| || ||| |||| || ||||||| || Sbjct 6516 AAACTCATCGATGCTGTTGGTCTTCTCTGGGTTGATCTTCAGCGTCGGGAAAGCCCGCGG 6575 Query 25402 GCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTC 25461 | | | | |||||||| ||| |||||||| || || | || ||||| ||| || || | Sbjct 6576 GGTGCGGC-CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGC 6634 Query 25462 CCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGA 25521 | | ||||||| || ||||| | ||||| || || | || || | || | Sbjct 6635 CGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCA 6694 Query 25522 GGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGG 25581 || ||||| || |||||||| || || |||| |||||||| | || | |||| Sbjct 6695 ACAGCGCATAGCTCGCAATGTTAAAAGGCACGCCGAGTCCCATGTCAGCT-GAGCGCTGG 6753 Query 25582 TAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGA 25641 || | ||| ||||||||||| ||| | ||||| ||||| || | ||| ||||| Sbjct 6754 TACATCTGGCACGAGAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGC 6813 Query 25642 GGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCT 25701 || || || || | ||| ||||||||| || ||| |||||||| | || Sbjct 6814 GGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCG 6873 Query 25702 TCTGGGTT-GTC-----CCTGATAA-GATCCGCGGTGTTTTGCAGCTGATCCACCCCCAT 25754 | |||||| ||| | || || || | || | ||||| || || ||| Sbjct 6874 TTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCT-------AGCTGGTCGACTCCCTG 6926 Query 25755 CCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCC 25814 ||||||||||| || |||| |||||||| || || || | | ||||||||| || Sbjct 6927 GCCCGAGTAGTCGGCGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAGCC 6986 Query 25815 GTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTC 25874 ||||| ||||| || || ||| |||| | || | | || | | |||| | || Sbjct 6987 ATACACTGGTCCGAGATCGCCAGCTTCACGATGTCCGAGACCGATGCTTTCCAGGTATTC 7046 Query 25875 TCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGT 25934 |||| |||||| | ||||| || | | ||||| || | | |||| |||||| Sbjct 7047 CTTGGATCCATTGCCATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGT 7106 Query 25935 GGACCCTCTGACGAACCACA 25954 | || |||| |||||||| Sbjct 7107 GTCGCCACTGATGAACCACA 7126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340077176256048