Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq756 132 6e-26 >seq756 Length=9614 Score = 132 bits (146), Expect = 6e-26 Identities = 372/564 (66%), Gaps = 9/564 (2%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || || ||||| |||||||| ||||||||||| | || | ||||| || | Sbjct 2411 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 2470 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || || Sbjct 2471 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGA-GCAGAACGAGCCC 2529 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || ||||| || || || || || || || || | | | ||| | | |||||| | Sbjct 2530 GAGAAGAAGATGCCCTCGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGG 2589 Query 32832 -TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 | || |||||| | ||||| | ||||||||| | |||||||| || ||||| Sbjct 2590 CGCGAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCG 2649 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || | || | ||| || || | || || | || || || || | || Sbjct 2650 ATGGCGCGGAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGC 2709 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 |||| ||||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 2710 GAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGCGCC 2769 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATTCCGT 33066 || | || ||| || || | | || |||| || | || || || || || || | Sbjct 2770 TCAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCAT 2827 Query 33067 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 33126 ||||||| || || ||||| | || || || ||||| || |||| || || | Sbjct 2828 CACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCGTTGTCCGTGAGGT 2887 Query 33127 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 | ||||| || |||| || | | || | ||||| | ||||| || |||| Sbjct 2888 TGTTCCAGTCCTTGAGGTCGTGCACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCGCCT 2947 Query 33187 CTGCCTTTTTATACATATTCCAGA 33210 | ||||| || ||||| | ||||| Sbjct 2948 CAGCCTTCTTGTACATCTGCCAGA 2971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633516552249600