Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq36 199 9e-46 >seq36 Length=34223 Score = 199 bits (220), Expect = 9e-46 Identities = 690/1057 (65%), Gaps = 51/1057 (5%) Strand=Plus/Minus Query 333314 CTCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAG 333373 ||| ||||| ||||| || ||||||| |||||||||||||||| || ||||| || Sbjct 10338 CTCCTTGTCCTCACCCGACTGGAAACGCCACTGGATATACTGGTTGGCCGTAATGTCGAG 10279 Query 333374 ATGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATG 333433 || ||||| |||||||||||||| ||||| || ||||| || | |||||| || || Sbjct 10278 GTGCTCCTCAATGTGGTGGAAAGCGTGCTGGGCAACGTAGGCGAAACGCATGGCCGGGTG 10219 Query 333434 CTTCCAAACACTTCCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCT 333493 |||||| || | ||| || | || | | ||||| |||| ||| ||||| || Sbjct 10218 CTTCCACACCGTACCGACCGTAGGCTCGACCTCACCCGTCAGCATCTTGATGAGCGTCGA 10159 Query 333494 TTTTCCCGCACCATTTTCGCCTACCACACCAATCCTGGAGTTCAGCGATACCTGGGCATT 333553 || || ||||| || || | || |||| | ||| |||||| || | | Sbjct 10158 CTTACCGGCACCGTTCGGACCGATAACGGCAATACGCGAGGCCAGCGA-ACACG-----T 10105 Query 333554 CACGTTG---TCAAAGATTA---GTTTTTCCGTACCCGGATACTTGAACCCCACACCGCG 333607 ||||||| ||| ||| | || || || || |||| | || || || Sbjct 10104 CACGTTGATGTCACGGATCGACGGCTTGTCGCGGCCAGGGTACTGGTACGAG-CAGTTCG 10046 Query 333608 T-AGCTTCATGAT-GGC--ACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGG 333663 | || ||||| ||| || | ||| ||||| | | ||||| || ||||| | Sbjct 10045 TGAGACGAATGATCGGCTTACCCTTGTTCT---TGATATCAGCAAGGAAACCCGGCTCAG 9989 Query 333664 GGAACTTCCACGTG--GTCTTCGTC-TCGGTAAGGGCGTAGTAACTCGCTGATTCGGGAC 333720 ||||| | || || | | || | || ||| ||||||| || | || || Sbjct 9988 GGAACGTGAACTTGAAGGCAGCGGCCTC---AAGCTCGTAGTACGTCTTGGCCTCCGGCT 9932 Query 333721 GCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGT 333780 || ||| ||||||||||| || || ||||||||| |||| ||||| |||| |||| Sbjct 9931 TCTGCTTGACGAACTCGGAGAGGTTACCCTTGTACGTCTTGAGCTTACGGTT---CTCGT 9875 Query 333781 AATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGC 333840 | ||||| || ||||| || | ||||||||| || |||||||| ||||| || | Sbjct 9874 AGTGGATGATGTTCGTGCAGACCGTGTCGAGGAAACCAGAGTCGTGCGACACGATGAGCG 9815 Query 333841 ACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAA 333900 ||| |||| | | ||| | | ||||| || |||||| | ||||| |||| | Sbjct 9814 ACGTCACGTTCGTGAGGCTCGTGAGGTAGTCCTCGAGCCACTTGACGTTGTGCACATCCA 9755 Query 333901 GATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAA 333960 ||||| |||||||| |||||||| || | | || |||| |||||| ||||| || | Sbjct 9754 AGTGGTTCGTCGGCTCATCAAGAAGGAGGATATCAGCCTTCATGAGCATGGCACGGGCCA 9695 Query 333961 GAGCGAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAA 334020 |||| ||||| ||||| || || | |||| | |||| |||| || | Sbjct 9694 ACTCGAGCTTCATCTTCCAACCACC--AGAGAGGGCACCGACAGGCA---TGGC-CTGCA 9641 Query 334021 TATC------AAAGCCAACCGATTCTAGAGTA-GTTAC-GATCTTTTCACGAGACCAAAT 334072 | || ||||| || || ||| | || || || || ||||| | | | Sbjct 9640 TCTCGGCCGTGAAGCCGAC--GCTCGTGAGCATGTCACGGACCTCCTCACGCGGC---AG 9586 Query 334073 GTTTTCCTTTACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGA 334132 ||| ||| | || ||| | ||||||||||||| | | | || || Sbjct 9585 GTT---CTTGAGGGCCTCGTCACAGAACATGAAGTCAATGACCGGAAGCTCAGCCTCCTC 9529 Query 334133 CCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTC 334192 | | ||| | ||| || ||| | | || || | ||||| | ||||| || || Sbjct 9528 AGCCTGGAGGTTGTGCTCGACGAAGACCGTCTTGAGCTCATCCTGGGTCGGGAAACCCTC 9469 Query 334193 AAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACA 334252 ||||| |||||| || |||||||| || || || ||||| ||||| || || || Sbjct 9468 GAGCTGGCCGTTCGAGATGGCGCGCATAAGCGTCGACTTACCGCAACCGTTCGGGCCGCA 9409 Query 334253 CAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCC 334312 ||||||||||||| |||||||| || || || | |||||||| ||||| | || Sbjct 9408 GAGACCGTAGCGGTGGCCACGCTTGAGGCGGAGACGGGCGTTGTTCAGCAGAATCATACC 9349 Query 334313 ACCATATGCCAGAGAAAATTCACAATCACACAGATCC 334349 ||| || || || || || || || | || |||||| Sbjct 9348 ACCGTACGCGAGCGAGAACTCGCAGTTGCAGAGATCC 9312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102674031645600