Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq422 248 1e-60 seq756 197 2e-45 seq3138 87.8 2e-12 >seq422 Length=12968 Score = 248 bits (274), Expect = 1e-60 Identities = 572/847 (68%), Gaps = 25/847 (3%) Strand=Plus/Plus Query 114551 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 114610 || ||||| | ||||| || || ||||| |||||||| |||||||| |||||||| Sbjct 968 ATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTACACGAGTCCTTGTACAGCATGTAC 1027 Query 114611 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCGGCTG-GCAC 114669 ||||| |||||||| | || |||| ||| || || ||||| || |||| || | Sbjct 1028 GGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAGA-----GCTGCTGCGCGC 1082 Query 114670 AG-TGGCGTTG---GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTT 114725 | | | ||| || || ||||| |||||||| ||| || || || ||||| | Sbjct 1083 GGATCGTCTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAACTCGT 1142 Query 114726 CACCC-ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 114784 ||||| ||| | | | |||| || ||||||| | |||||||| || ||| | || Sbjct 1143 CACCCCACGTCGTGT-AGAGACCCGGTGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCG 1201 Query 114785 CCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGA 114844 ||||||| |||||||||||||| || || ||||| | || |||| ||||| ||| Sbjct 1202 TTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCACATCGCGTAGAACAGATCACGA 1261 Query 114845 CAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 114903 ||| || || | | || || || | || | || || | ||| || || Sbjct 1262 GCGCGGTGCAGCT-CGTTGCCGTGGTTCTTCTTGAGGTCGAGGAACTCGAAGATGTCGGC 1320 Query 114904 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTTTAC 114960 ||||||||| || || |||| ||||| || ||||| || | ||| |||| | || Sbjct 1321 GTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGCGCTTGCCGCCACCCTGATCCAC 1380 Query 114961 ATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATT 115020 ||| | ||| ||| | || || ||||| ||||| || | || || | || ||| || Sbjct 1381 ATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTT 1440 Query 115021 TGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCC 115078 || || || || ||||| || | || | || | || | | | |||||| || Sbjct 1441 CGTGCCACGGATGTACGAG--TTGGTCGCGCGGATGTTGTGCACGCTGACACCAATGCCG 1498 Query 115079 CCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAG 115138 || |||||||| ||||| ||||||| | |||| || | ||||| || ||||||||| Sbjct 1499 CCGGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCATAGATGCCCTCGATCGAG 1558 Query 115139 TCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTG 115198 ||| |||| | |||| |||||||| ||||| || || | || || || |||||| Sbjct 1559 TCATCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCGGCGTTG 1618 Query 115199 AAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAG 115258 || || || || |||||||| |||| | | ||| ||||| | ||||| ||||| | Sbjct 1619 AACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCGTACGTCTCGAGC 1678 Query 115259 ACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTG-GGG 115317 ||||| ||||| | | ||| || |||| | ||| |||| || ||| | || ||| Sbjct 1679 GCGGCGTCGATGTCATGCTTGTGGATGCCGACAGCGACGCGCAGAATCATCTGCTGCGGG 1738 Query 115318 TGTTTCCATC-AGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGAC 115376 | | || | | | ||| ||| | | ||||||| |||||| | ||||||| | Sbjct 1739 CGCT--CAGCGACCTTGCCACCGACGCGCAGGAGGTACGACTTCTCGAGCGTCTTGAAGC 1796 Query 115377 CAAAATA 115383 |||| || Sbjct 1797 CAAAGTA 1803 >seq756 Length=9614 Score = 197 bits (218), Expect = 2e-45 Identities = 399/581 (69%), Gaps = 16/581 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || || ||||||||||||||||| ||||| || | | ||| | ||||| Sbjct 2133 GTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCAT 2192 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 125876 | || || |||||| || | || |||||| | |||| | | |||||| | Sbjct 2193 CCAGTCGAACGGGTTCGACACCTTGTAGATC-TTGGCAACGCCAAGCGCGTGGAGGAGGC 2251 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 |||| | | | |||||||||||| |||| ||||||||||||||||| | Sbjct 2252 GATCGGCGCAGAACTCAATGTACTGGCACATGAGAGACGAGTTCATACCGATGAGCTCCA 2311 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 ||||||| |||| || |||| ||||||| || | || || || || | ||| ||| Sbjct 2312 CCGGGAGCGAGTCCTGGACGAACTCCTTCTCGATCGCGACAGCATCGCGAATGATCTCGT 2371 Query 125997 GAATG-GTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC-GGCA----A 126050 | ||| | | | || | | ||| || |||| |||| | | |||| | Sbjct 2372 GGATGCGAGACTCGGGGAGCTTGTTGGCG---AG-CTTG--GAGTACAGCAGGCACGCGA 2425 Query 126051 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCA 126110 | || |||||||||||||||||| |||||||| || |||||||||| || || |||| Sbjct 2426 AGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGCTGAGGCCAGGCA 2485 Query 126111 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCT 126170 | || || |||||||| | |||||| || | || || || |||||||||||||| |||| Sbjct 2486 TAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCGAGAAGAAGATGCCCT 2545 Query 126171 CCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAAACCAC 126229 | || |||||||| | || |||||| || || | ||||| | | ||| ||||| Sbjct 2546 CGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGGC-GCGAGTCGCACCAC 2604 Query 126230 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 126289 || | |||||| || ||||| |||| | ||| |||| |||| ||| || | || Sbjct 2605 TTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCGATGGCGCGGAGAAGG 2664 Query 126290 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330 | ||||| || | | || ||||||||| | || ||||| Sbjct 2665 TGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAG 2705 >seq3138 Length=2987 Score = 87.8 bits (96), Expect = 2e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 172811 GGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTC 172870 ||||| || ||||||| ||| || ||||| ||||| || ||| | ||||| ||| || Sbjct 2719 GGGAAGACGCCGTAGTAATCGCGTCCAACAACAGAGAGGCCACTGATTGCGAAGGTTTTG 2778 Query 172871 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTG 172930 || || || ||||| |||| || ||||| || ||| || | || || || || | | Sbjct 2779 GCTGACTCGCCCTCAGTCAGAATCAGCGTGCAGTTTTGAGCCTTCGCTGTGCCGGCGTAG 2838 Query 172931 TTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGACTT 172971 ||||||||||| | ||| || || || || | ||||| || Sbjct 2839 TTCGCATCGTCGAGCTTTGGGATTCCTGTTAACTTGGATTT 2879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597244762174080