Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq1720 123 1e-23 >seq1720 Length=5393 Score = 123 bits (136), Expect = 1e-23 Identities = 329/499 (66%), Gaps = 9/499 (2%) Strand=Plus/Minus Query 66065 CGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGA 66124 ||| | |||||||||||| || | ||||| | | |||||| | |||||| || | Sbjct 5207 CGCGTTCATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAA 5148 Query 66125 TGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66184 ||||| | ||| | |||||| ||| | ||||||||||| || ||||||| || Sbjct 5147 CATCGACGAGCTCTACATCTCGCAGCCCGACTCGGGCGAGCAGGCGCTCGAGATCGCCGA 5088 Query 66185 CCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGT 66244 | || || ||| |||| || | || |||| || ||| || || || || || Sbjct 5087 CACGCTTGTGCGGTCGGGCGCCGTCGACGTCGTCGTCGTCGACAGCGTCGCTGCGCTTGT 5028 Query 66245 GCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCT 66304 |||||| || ||||| ||||| || || || || ||| ||| |||| || || || Sbjct 5027 GCCGCGCGCCGAGCTGGAAGGCGAGATGGGCGATCAGCAGATCGCGTTGCAGGCGCGGCT 4968 Query 66305 GATGTCTCAGGCCATGCGCAAGCTGACCGGCACGAT-TGCCAG--CACCAACACGCTCAC 66361 ||| ||||| |||||||||| || || || | || || || | || ||||| Sbjct 4967 CATGAGCCAGGCGCTGCGCAAGCTCACGGGATCGCTGAGCAAGTCCAACTGCATGCTCA- 4909 Query 66362 CCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGAC 66421 | | |||| ||| | ||| |||| | || | | | || || || ||| Sbjct 4908 --TCTTCCTGAACCAGATCCGCCAGAAAGTGGGTATCCT---CTTTGGTTCGCCCGAGGT 4854 Query 66422 CACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGAT 66481 ||| | || || | ||| ||||||| |||||| || ||||| | || | || | | Sbjct 4853 CACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCCGTGCGGCTCGACATTCGGCGCAA 4794 Query 66482 CGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAA 66541 ||| | ||||||||||| ||| ||||||||| | ||| ||||| | ||| Sbjct 4793 GGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGTCGCCAA 4734 Query 66542 GAACAAGCTGGCGCCTCCG 66560 ||||||||| ||| | ||| Sbjct 4733 GAACAAGCTCGCGTCGCCG 4715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242427326345792