Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq422 145 7e-30 >seq422 Length=12968 Score = 145 bits (160), Expect = 7e-30 Identities = 297/436 (68%), Gaps = 9/436 (2%) Strand=Plus/Minus Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 |||||||| || || || || ||| | ||||||||||| | ||| | ||| | Sbjct 1752 AAGGTCGCTGAGCGCCCGCAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCACAAGCAT 1693 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 |||||||| |||| ||| || ||||| | ||||| |||| || |||||||||||| Sbjct 1692 GACATCGACGCCGCGCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCG 1633 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 | || || ||||| |||||||||| | || ||| |||| ||||| || ||||| Sbjct 1632 ACGCCGACGCTGTTCAACGCCGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTC 1573 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATT 123137 || || || ||| ||| || |||||||| || | | ||||| | || Sbjct 1572 GCCATGAAGGATGACTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCCTGCATC 1513 Query 123138 TCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCCG- 123196 ||||| | | ||||||||| || || | ||||||| || | | | || || || Sbjct 1512 TCCAAGTGGGCCGGCGGCATTGGTGTCAGCGTGCACAACATCCGCG--CGACCAACTCGT 1455 Query 123197 -CATCAGAAGCACCGACGGAATCG-CCTCCGGGCTCGAATCCATGCTGCGAGTTTACAAT 123254 |||| | |||| |||| ||| | ||| |||| |||||||||| || | ||| Sbjct 1454 ACATCCGTGGCACGAACGG-CTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGTTCAAC 1396 Query 123255 AACGCCGTGCGGCACGTCGACCAG---GGCGGCAAACGCAAAGGCGCGATGGCGATCTAT 123311 || | | ||| | || || ||| |||||||| ||||| ||| || | ||||| ||| Sbjct 1395 GACACGGCGCGTTATGTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTAT 1336 Query 123312 CTAGAACCGTGGCACG 123327 || || |||||||||| Sbjct 1335 CTCGAGCCGTGGCACG 1320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451920845016960