Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq422 212 1e-49 seq756 118 2e-21 >seq422 Length=12968 Score = 212 bits (234), Expect = 1e-49 Identities = 389/560 (69%), Gaps = 15/560 (3%) Strand=Plus/Plus Query 203885 AGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGT 203944 || |||||||| || ||||| || ||||||| |||| |||| | ||||||||| | ||| Sbjct 1 AGGTAGTACATACCCGTCTTGAGACCCTTCTTCCACGCGTAGAAGTGCATGGACGTCAGC 60 Query 203945 TTGCTCACGTTGGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGC 204004 ||||| | | || || || ||||| | || || |||||||| ||| |||| | ||| Sbjct 61 TTGCTGATCGTCGGCTCCGCGATGTGCACATTGAGCGACTGGCTCTGGCAGATGTA-GGC 119 Query 204005 GCC-CGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAA 204063 ||| || || |||||||| | || | || ||||||| |||||||||||||||||| | Sbjct 120 GCCGCGGTCGGCGGCCATGTCGAGCACGGCCTTCTGCTTGATCTCCCACACCGTCTTGTA 179 Query 204064 CACGTCTCTGGTGTGTTGAGG---CACATCTTCCCACGTCCTGATC-GAGCCGTTGTCGG 204119 | || | | | || |||| | ||||| ||| | ||||||| |||| Sbjct 180 CTTCTCCTTCACGGCATCCGGGATCACA----CGCACGTTCTGCACTGAGCCGTGGTCGT 235 Query 204120 CCATCAGTCTCATC-CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACC 204178 || | ||| | | | ||| | ||| ||||| | | ||| |||||| || | Sbjct 236 GCAGGA-TCTGGTTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATC 294 Query 204179 AGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTG 204238 |||| ||| | |||| || || || | ||||| | ||| || ||| |||| | Sbjct 295 AGGTACTTGTTCACGATCGTGAACTCGCCTGCAAGCACGCGGCGGTTGTACATGTTGGTC 354 Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298 ||||| || |||| || |||||||||||||| ||||| ||||| ||||| ||||| Sbjct 355 GTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCGGTCGACGCCGTCGGCATC 414 Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTC 204358 || || || ||||| ||||||||||| ||||| | ||| ||| ||| || | || | Sbjct 415 GGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTGGCCTTGAGCGCGGCC 474 Query 204359 CAGTCGTGCA--TCGCAC-TGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGA 204415 ||||| | || || | || | ||||||||||||||| |||| |||||||| | Sbjct 475 CAGTCCCAGAGGCCGGACGTCGGCGTGACGCCCCACATGTCGTACTGGAAGATGCCCTTG 534 Query 204416 CTGACTGGGCTGCCCTTGTA 204435 || || || ||||| ||| Sbjct 535 CTCACGGGTGAGCCCTCGTA 554 Score = 127 bits (140), Expect = 3e-24 Identities = 445/677 (66%), Gaps = 26/677 (4%) Strand=Plus/Plus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 ||||||||| |||||||||||||| ||||||||||||| |||| ||||| | || |||| Sbjct 982 CTGCTGGTTCGACTTGCGGTTACACGAGTCCTTGTACAGCATGTACGGCGTGCCCGTCTC 1041 Query 204991 CATCTGAGA-TCGCAGAATGTGGGTCCACAATT----CGCGAGCCTCCACTTGCTTCACG 205045 ||||| || ||| || || | ||| | | |||| | || ||||| || Sbjct 1042 GATCTGCGACTCG-AGGATCGCGAACCAGAGCTGCTGCGCGCGGATCGTCTTGCG---CG 1097 Query 205046 TACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCC 205105 | |||| | | |||||| | |||||||||| | || || ||| |||||| Sbjct 1098 CGCGGCCCTCGCG-CTCGTACTGGTGGTACAGCGCCTCGAACTCGTCACCC--CACGTCG 1154 Query 205106 ATCAG---CCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTCACC 205162 || ||| | | | || ||| || | ||| |||| | | | | || Sbjct 1155 TGTAGAGACCCGGTGCCTCGTTCGGG-CAGAACAGGCTCCACTCGCCGTTGGCCTCAACG 1213 Query 205163 CTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCG 205222 | || ||| || || ||| ||||||| |||| ||||||||||| || | | | | Sbjct 1214 CGCTTCATGAAGAGATCGGGAATCCACATCGCGTAGAACAGATCACGAGCGCGG-TGCAG 1272 Query 205223 -TCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCT 205280 |||| || ||||||| || | ||| || || || | ||||||||||||||||||| Sbjct 1273 CTCGTTGCCGTGGTTCTTCTTGAGGTCGAGG-AACTCGAAGATGTCGGCGTGCCACGGCT 1331 Query 205281 CTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCA 205340 | | ||| || | | ||| | |||| |||||||| ||||| || | | Sbjct 1332 CGAGATACATCGCGAACGAGCCCTTGCGCTTGCCGCCACCCTGATCCACATAACGCGCCG 1391 Query 205341 TCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGA 205400 | ||||||| || |||||||| ||||| || ||||| | | |||||||||| || Sbjct 1392 TGTCGTTGAACACGCGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGCCACGGA 1451 Query 205401 TGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGG 205460 || |||| || | | |||| | | | ||||| ||||| | ||||||| Sbjct 1452 TGTACGAGTTGGTCGCGCGGATGTTGTGCACGCTGACACCAATGCCGCCGGCCCACTTGG 1511 Query 205461 CGATCTGGGCGCACT-CTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGT 205519 ||| |||||||| |||| || ||| |||||||| |||| || || ||| || Sbjct 1512 AGATGCAGGCGCACTGCTTG-AGCGTGTCATAGATGCCCTCGATCGAGTCATCCTTCATG 1570 Query 205520 GTCACCAGATAGCACGAAGCCAGCT--TGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGG 205577 | | ||| ||||||| | ||||| ||| | ||||| |||| ||| ||||| | Sbjct 1571 GCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGG--CGTGCCGGCGTTGAACAGCGTCG 1628 Query 205578 GGCTGGCGTGGCTGAAG 205594 | | ||||| ||||| Sbjct 1629 GCGTCGCGTGCGTGAAG 1645 >seq756 Length=9614 Score = 118 bits (130), Expect = 2e-21 Identities = 260/382 (68%), Gaps = 12/382 (3%) Strand=Plus/Plus Query 159915 ACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACA 159974 |||| |||||||| ||||||||||| || |||||||| || ||||||| |||||| || | Sbjct 2411 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 2470 Query 159975 TGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGC 160034 | ||||||| ||||| | || ||| |||||||| || || | ||| || | | | Sbjct 2471 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAG-AGCAGAACGAGCCC 2529 Query 160035 TA-AAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 | || ||||| ||||| ||||| || ||||| |||| | ||| | || | ||| Sbjct 2530 GAGAAGAAGATGCCCTCGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGC---- 2585 Query 160094 GTGTCATGGGTC-CACCTTTTG---GCCCATTCAGCCTTCTT-TGCGATGCACGGCATGC 160148 | | | | ||| |||| ||| ||||| | |||||||| ||| | || || || Sbjct 2586 GCGGCGCGAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGC-ACACAAGGGATCG 2644 Query 160149 GCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCA 160208 ||||| |||| | | || || ||| || |||||||| || | || | Sbjct 2645 TCTCGATGGCGCGGAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGA 2704 Query 160209 GCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATG 160268 || |||||||| || | ||| | || || || || ||||| ||| |||||| | Sbjct 2705 GCAGCGAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAAC 2764 Query 160269 TCGCCTCCAGATACTGCACCTC 160290 |||||| || ||||||||| Sbjct 2765 GCGCCTCAGGAACCTGCACCTC 2786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795010322722560