Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq756 239 5e-58 seq170 129 6e-25 >seq756 Length=9614 Score = 239 bits (264), Expect = 5e-58 Identities = 395/559 (71%), Gaps = 12/559 (2%) Strand=Plus/Plus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| || ||| || |||||||| || | |||||||| | || ||||| ||||| || Sbjct 2411 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 2470 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | | | ||| ||||| |||||||| || |||||||| || || | | ||| ||||| Sbjct 2471 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 2530 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| |||||||||||| ||||| || || | |||||| |||||| ||| | Sbjct 2531 AGAAGAAGATGCCCTCGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCG-CGG 2589 Query 133067 TGCTGG-CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 || | || ||| |||||||| | |||||| | | || || || ||||| ||| Sbjct 2590 CGCGAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCG 2649 Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGA--GGAACGC-ACGTAGGTGTCGATGAGG 133182 |||||| | | || | |||| || | || | | ||| ||||||||||| Sbjct 2650 ATGGCGCGGAGAA---GGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGC 2706 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 ||| |||| |||||||| | |||||| || || || || |||||||| ||||| ||| Sbjct 2707 AGCGAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGC 2766 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGC-TCGACCAGATTTTCGTTGACGATGCC 133301 ||||| |||||||| || ||| | ||| | || || |||||||||||||| Sbjct 2767 GCCTCAGGAACCTGCACCTCGCTGCTGAAGTTCATCG-CGAGGTTCTCGTTGACGATGCC 2825 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 || ||||| ||||| || || |||||||||||||| || | |||||||||||| | | Sbjct 2826 ATCACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCGTTGTCCGTGAG 2885 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGAC-AGGTCCACCTCCTCGACGGTCCAAAACGACG 133420 | | |||||| | | | | || || ||||| | ||| || | ||||| || || Sbjct 2886 GTTGTTCCAGTC-CTTGAGGTCGTGCACGAGGTCGATCTCTTCAGCCGTCCAGAAGCTCG 2944 Query 133421 CCTCGGCTTTTTTGTACAT 133439 |||| || || |||||||| Sbjct 2945 CCTCAGCCTTCTTGTACAT 2963 >seq170 Length=18893 Score = 129 bits (142), Expect = 6e-25 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || ||||| || || || || ||||| || ||||| ||||||||||| | Sbjct 6454 AAAGATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAGCC 6513 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||||| | | | | || | || |||| ||||| |||||||| || | || Sbjct 6514 TTCGGACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGA 6573 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 || ||||| || || | ||| ||||| ||||| || |||| ||||| ||| ||||| Sbjct 6574 TCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTA 6633 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||||||| || | ||||| || Sbjct 6634 CAACATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCG 6672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500081668515840