Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq422 156 5e-33 seq327 138 1e-27 seq756 105 8e-18 >seq422 Length=12968 Score = 156 bits (172), Expect = 5e-33 Identities = 668/1042 (64%), Gaps = 28/1042 (3%) Strand=Plus/Plus Query 110173 GGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCA 110232 ||||| ||||| |||||||||| ||||| || ||| || ||| ||||| || Sbjct 776 GGGTAGTAGTTGATGTCGATGACCTTGTTGAGGTTGCGCGTGACGACCTTGGTGATGTCG 835 Query 110233 TGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGGAGAGCAATA 110292 | || || | | | ||||| || || || | || ||| | |||| || || || Sbjct 836 TACAGCTTCTTGAAGTCGAAGGTCTTG---TCGTCGTTCACAAACTTGGACAGCGCGATG 892 Query 110293 GACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCG--GTGTATTCCAAAATTTCCGTAC 110350 ||||| || |||||||| | |||||| | || ||||| || | | || | Sbjct 893 GACGCGAGGTTGCACACCGCGACCTCGTCG--GGCGACGTGTACTCGAGCACCTCGCAGC 950 Query 110351 ACAAGTTG---GAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATG 110407 | | |||| || | | || || | ||||| ||| ||||| ||| ||| || | Sbjct 951 AGAGGTTGCTCGAGCGGATCGTG---CCGAGGTTCTGCTGGTTCGACTTGCGGTTACACG 1007 Query 110408 CATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCC 110467 ||||| || |||||||| || || || || || |||| |||| ||| || || || Sbjct 1008 AGTCCTTGTACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACC 1067 Query 110468 ATACAT-CGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGT 110524 | | | | ||| || ||| || |||| ||| | || || |||||||| | || Sbjct 1068 AGAGCTGCTGCG-CGCGGATCGTCTTGCGC--GCGCGGCCCTCGCGCTCGTACTGGTGGT 1124 Query 110525 ACAAGTCCTCAAATTCCTGTCCGTACACATCAG--AAAGACCCTTCGCCTTGTCGGGACA 110582 ||| |||| || || | || ||| || | |||||| |||| || || || Sbjct 1125 ACAGCGCCTCGAACTCGTCACCC--CACGTCGTGTAGAGACCCGGTGCCTCGTTCGGGCA 1182 Query 110583 GAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACAT 110642 ||| ||| ||| | || ||||||| | ||||||||| || || ||||||||||| Sbjct 1183 GAACAGGCTCCACTCGCCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCACAT 1242 Query 110643 CGCCGAGAAAAGGTCACG-GCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCA 110701 ||| |||| || ||||| || | || | || | || ||||| || || | Sbjct 1243 CGCGTAGAACAGATCACGAGCGCGGTGCAGC-TCGTTGCCGTGGTTCTTCTTGAGGTCGA 1301 Query 110702 AAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG-- 110759 || || | ||| || | |||||| || |||||||| | |||| || ||||| || Sbjct 1302 GGAACTCGAAGATGTCGGCGTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGCGCT 1361 Query 110760 -ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAA 110818 | || |||| | ||||| || || ||| | ||||| || | ||||| || | | Sbjct 1362 TGCCGCCACCCTGATCCACATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCACGA 1421 Query 110819 TTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGA 110878 || | || || || || || | || || || | || || |||| ||| | Sbjct 1422 GGCCGTTCGACGAGCCGTTCGTGCCACGGATGTACGAGTTGGTCGCGCGGATGTTGTGCA 1481 Query 110879 TATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCAT 110938 | |||||| || || |||||||| || || |||| |||| || ||| Sbjct 1482 CGCTGACACCAATGCCGCCGGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCAT 1541 Query 110939 AAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGAC 110998 | || || || ||||| || |||| |||| | || ||||| || |||| ||| || | Sbjct 1542 AGATGCCCTCGATCGAGTCATCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGC 1601 Query 110999 GAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCT 111058 | ||||| || || ||||| || || || ||||| || |||| | | ||| ||||| | Sbjct 1602 GCGGCGTGCCGGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGT 1661 Query 111059 TGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCA 111118 | ||| || ||||| |||| | | || | ||| || || | || || |||| Sbjct 1662 ACTCGTACGTCTCGAGCGCGGCGTCGATGTCATGCTTGTGGATGCCGACAGCGACGCGCA 1721 Query 111119 TGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCT 111178 | ||| | || || || | ||| ||| | || ||| | ||||| ||||| Sbjct 1722 GAATCATCTGCTGCGGGCGCTCAGCGACCTTGCCACCGACGCGCAGGAGGTACGACTTCT 1781 Query 111179 CTAGGGTCTTGAGACCAAAGTA 111200 | || ||||||| |||||||| Sbjct 1782 CGAGCGTCTTGAAGCCAAAGTA 1803 >seq327 Length=14399 Score = 138 bits (152), Expect = 1e-27 Identities = 319/475 (67%), Gaps = 33/475 (7%) Strand=Plus/Plus Query 11496 AATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTT 11555 ||||| ||||||||||||||| || || || | || | || ||||| ||||||||||| Sbjct 2053 AATCTGACGATCGAAACGACCCGGACGAAGAATGGCCTTGTCGAGAATGTCGACACGGTT 2112 Query 11556 TGTAGCGGCAATGACTACAATGCCAGTCTCATT---GTCGAAACCGTCCATTTCTGTGAG 11612 ||| | |||| || || | ||| ||| | || ||| |||||||| || ||| Sbjct 2113 CGTACCCGCAAGCACAACCACGCC---CTCGCTCGAGTTGAAGCCGTCCATCTCGACGAG 2169 Query 11613 AAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACGCTT 11672 |||||||||| || | || ||||| || || |||||| | ||||| | Sbjct 2170 CAGCTGGTTGAGTGTGTTCTCTCGCTCGTCATT---------ACCACCAGA-GAACGTTC 2219 Query 11673 C-TTAC------------CGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGT 11719 | |||| ||||||| || || ||||||||||| || || ||||| || Sbjct 2220 CCTTACTACGTGCACGAGCGACAGCATCGATTTCATCGATGAAGACAATGCACGGAGAGT 2279 Query 11720 TGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCT 11779 | || || || | ||| | ||||| |||||| || || ||||| || ||||||| Sbjct 2280 TTGCCCGAGCTTCACGGAACAAATCACGCACACGCGACGGACCCACACCGACAAACATCT 2339 Query 11780 CAACGAAGTTTGCGGCAG-AACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCT 11838 ||| ||| | | | | | || |||||| ||| || ||| ||| |||||||| | || Sbjct 2340 CAATGAAATCCGAGCCCGAAATACTGAA-GAATGGCACACTAGCTTCACCAGCCGTTGCC 2398 Query 11839 CGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATC 11898 || || || |||||||| || || || | || | || ||||| || |||||| Sbjct 2399 TTCGCAAGCAGGGTCTTACCAGTGCCCGGAGGTCCGACAAGCAGGGCACCCTTCGGGATC 2458 Query 11899 TTGGCACCACTTCCAAAGTAGCGC-TCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 || ||||| || | | ||| || || ||| |||||| || |||| |||| Sbjct 2459 TTAGCACCGAGATCAGTGAATCGCTTCTGGTTTC-GGAGGAAATCAACAAACTCC 2512 >seq756 Length=9614 Score = 105 bits (116), Expect = 8e-18 Identities = 170/242 (70%), Gaps = 3/242 (1%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || || ||||||||||| || ||||| || |||||||| || || Sbjct 2434 TGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGCTGAGGCCAGGCATAAGGCCG 2493 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||| | || || || || |||||||||||||| || Sbjct 2494 CGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCA 2553 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAG-GTCGAG--ACTTGTCGAACCACTTGAGAGCC 119684 ||||| |||| | |||||| || || | | || | | |||| |||||||||| ||| Sbjct 2554 GCGAACGCGACGATACGCTCGGCGAACGCGGCGCGGCGCGAGTCGCACCACTTGAGCGCC 2613 Query 119685 CAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTT 119744 |||| |||||| || | || |||| || | |||||| || ||| || ||||| Sbjct 2614 CAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCGATGGCGCGGAGAAGGTGGTTCTTC 2673 Query 119745 TC 119746 || Sbjct 2674 TC 2675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588868688572800