Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq875 187 2e-42 seq2106 82.4 6e-11 >seq875 Length=8764 Score = 187 bits (206), Expect = 2e-42 Identities = 367/543 (68%), Gaps = 0/543 (0%) Strand=Plus/Plus Query 29789 CGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGT 29848 |||||||| ||| ||||||||||| || | || ||||| ||| || || || | |||| Sbjct 6584 CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 6643 Query 29849 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 29908 ||| || ||||| | ||||| ||||| || || || | || | || | | Sbjct 6644 GGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCAT 6703 Query 29909 AGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGAC 29968 |||| || |||||||| || || ||||| |||||||| | || | |||||| | ||| | Sbjct 6704 AGCTCGCAATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGGC 6763 Query 29969 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCA 30028 |||||||||| |||| | ||||| ||||| || | |||| ||||| || || |||| Sbjct 6764 ACGAGAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGCGGCAGCGCCA 6823 Query 30029 TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGT 30088 | | ||| |||||||| || ||| ||||||||| | || | |||||| Sbjct 6824 TCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGTTCG 6883 Query 30089 TCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCC 30148 || ||| || | | | | ||||| || || ||| ||||||||||| || Sbjct 6884 TCTTGAGCTTGTGAATGACCTCCGCTAGCTGGTCGACTCCCTGGCCCGAGTAGTCGGCGT 6943 Query 30149 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208 |||| |||||||| || || || || | ||||||||| || ||||| ||||| || | Sbjct 6944 GCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGAT 7003 Query 30209 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268 | || |||| | || ||| || | | |||| | || |||| || ||| | | Sbjct 7004 CGCCAGCTTCACGATGTCCGAGACCGATGCTTTCCAGGTATTCCTTGGATCCATTGCCAT 7063 Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACC 30328 |||| || | | ||||| || | | |||| ||||||| || |||| ||||| Sbjct 7064 CCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACC 7123 Query 30329 ACA 30331 ||| Sbjct 7124 ACA 7126 >seq2106 Length=4523 Score = 82.4 bits (90), Expect = 6e-11 Identities = 101/130 (78%), Gaps = 6/130 (5%) Strand=Plus/Plus Query 52047 CCAGAGATGGGCGACAAGTTT-GC-GTCGTTCACGGCGCAAAAGGGGACGTGCGGAGCCG 52104 || ||||| ||||||||||| || |||| |||||| || ||||| |||||| | Sbjct 3352 CCCGAGATCGGCGACAAGTTCAGCAGTCGC-CACGGC-CAGAAGGGCGTGTGCGGCACGA 3409 Query 52105 TCCTGACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATC 52163 ||| | ||||||||||||||| ||| || | ||||| || |||||| ||||| ||||| Sbjct 3410 TCCGCAACCAGGAGGACATGCCGTTCAACGACGACGGCGT-GTGCCCGGACCTGATCATG 3468 Query 52164 AACCCCCACG 52173 ||||| |||| Sbjct 3469 AACCCGCACG 3478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408545011126448