Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq756 196 9e-45 seq422 159 6e-34 >seq756 Length=9614 Score = 196 bits (216), Expect = 9e-45 Identities = 557/850 (66%), Gaps = 25/850 (3%) Strand=Plus/Minus Query 25480 TGGGAGATGTACAAGAAGGCTCAA---AACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 ||| ||||||||||||||||| | | || |||||| || |||||||| || || Sbjct 2969 TGGCAGATGTACAAGAAGGCTGAGGCGAGCTT---CTGGACGGCTGAAGAGATCGACCTC 2913 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGTAC 25596 | | ||| | | | |||| || || | | |||||| | ||| ||||| || Sbjct 2912 GTGCACGACCTCAAGGACTGGAACAACCTCACGGACAACGAGCGCTACTTTATCAAGCAC 2853 Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGA-GAGATT 25655 ||| | || ||||| || ||| |||||| || || |||||||| || |||| || || Sbjct 2852 GTGCTCGCGTTCTTCGCGGCCAGTGATGGCATCGTCAACGAGAACCTC-GCGATGAACTT 2794 Query 25656 CACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714 || ||| || |||||| | | || |||| || |||||||| |||||||| || || | Sbjct 2793 CAGCAGCGAGGTGCAGGTTCCTG-AGGCGCGTTGCTTCTACGGCTTCCAGATTGCGATTG 2735 Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCG 25771 | || | ||||| |||||||| | ||| || || |||||||| | ||| Sbjct 2734 AGAACATCCACTCGGAGGTGTACTC---GCTGCTCATCGACACGTACATCAAGGACCAGA 2678 Query 25772 CCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 |||||| | | || | | ||||||||| || || | | ||| |||||| | Sbjct 2677 CCGAGAAGAACCACCTTCTCCGCGCCATCGAGACGATCCCTTGTGTGCAGAAGAAGGCCC 2618 Query 25832 GGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 ||||| | |||||| | || | |||| |||| | |||||| | || || | Sbjct 2617 ACTGGGCGCTCAAGTGGTGCGACTCGCGCCGCGCCGCGTTCGCCGAGCGTATCGTCGCGT 2558 Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAG 25950 | ||||| || ||||||||||| ||| || ||||| ||| | ||||||||||||||| Sbjct 2557 TCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCTGCT-CTATCTTCTGGCTCAAG 2499 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || ||||| || || ||| || |||||||||||| | ||||||||| Sbjct 2498 AAGCGCGGCCTTATGCCTGGCCTCAGCTTCTCGAACGAGCTCATCTCGCGTGACGAGGGT 2439 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAA 26070 |||||| | || || || |||||||| ||| ||| | ||| || || | | | Sbjct 2438 CTCCACTGCGACTTCGCGTGCCTGCTGTAC----TCCAAGCTCGCCAACAAGCTCCCCGA 2383 Query 26071 GAGAC-CGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNN 26129 | | | || || ||||| || ||||| | ||||||||||||||| Sbjct 2382 GTCTCGCATCCACGAGATCATTCGCGATGCTGTCGCGATCGAGAAGGAGTTCGTCCAGGA 2323 Query 26130 NNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGTA 26189 | || |||||| |||||| |||| |||||||||| Sbjct 2322 CTCGCTCCCGGTGGAGCTCATCGGTATGAACTCGTCTCTCATGTGCCAGTACATTGAGT- 2264 Query 26190 TGTG-GCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248 | || ||||| | || || | ||| || | |||| |||||| | | |||| Sbjct 2263 TCTGCGCCGATCGCCTCCTCCACGCGCTTGGCGTTGCCAAGATCTACAAGGTGTCGAACC 2204 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 ||||||||| ||||| | || ||| | | || |||||||||||||| || ||| | | Sbjct 2203 CGTTCGACTGGATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCG 2144 Query 26309 TCGGCGACTA 26318 | ||||| || Sbjct 2143 TGGGCGAGTA 2134 >seq422 Length=12968 Score = 159 bits (176), Expect = 6e-34 Identities = 612/947 (65%), Gaps = 27/947 (3%) Strand=Plus/Plus Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773 || ||||| ||||| || |||||||| || |||| | | ||| |||||| Sbjct 896 GCGAGGTTGCACACCGCGACCTCGTCGGGCGACGTGTACTCGAGCACCTCGCAGCAGAGG 955 Query 221774 TTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTG 221833 ||||| | ||| || || |||| | || || |||||||| || | ||||||| Sbjct 956 TTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTACACGAGTCCTTG 1015 Query 221834 TAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCT 221893 || ||||| | || ||| ||||| | ||| | | | || ||| | |||||| | Sbjct 1016 TACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAGAGCTG- 1074 Query 221894 CTG-GCGCTCACCGTCCTCTTGACTGCAC---CCTCGGTCTTTTCATACCCGGTATAGAG 221949 ||| |||| | |||| ||| || | ||||| || | ||| | || || Sbjct 1075 CTGCGCGCGGATCGTC---TTGCGCGCGCGGCCCTCGCGCT---CGTACTGGTGGTACAG 1128 Query 221950 CATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG--CGGGACACATC 222007 | || |||| ||||| ||| | || || || || ||| | |||| || | | Sbjct 1129 CGCCTCGAACTCGTCACCCCACGTCGTGTAGAGACCCGGTG-CCTCGTTCGGG-CAGAAC 1186 Query 222008 AGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCC 222067 || ||||| | |||| | | || | || ||||||||| || || ||||||| ||| Sbjct 1187 AGGCTCCACTCGCCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCACATCGCG 1246 Query 222068 TGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAAC 222127 | || ||||| | | || ||| ||| ||||| ||| ||| | || || | ||| Sbjct 1247 TAGAACAGATCACGAGCGCGGTGCAGCTCGTTGCCGTGGTTCTTCTTGAGGTCGAGGAAC 1306 Query 222128 TCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTG 222187 || || ||||| |||||||||||||| ||||| | || | | ||| |||||| | Sbjct 1307 TCGAAGATGTCGGCGTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGCGCTTGCCG 1366 Query 222188 CCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCG 222247 |||||||||||||| | | || ||||||| | ||| || | || || || ||| Sbjct 1367 CCACCCTGATCCACATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCACGAGGCCG 1426 Query 222248 TTGGATCGA-CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT--TACTGGCA 222304 || || ||| ||||| ||||| ||||||| | || | | || | | || Sbjct 1427 TTCGA-CGAGCCGTTCGTGCCACGGATGTACGAGTTGGTCGCGCGGATGTTGTGCACGCT 1485 Query 222305 GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATG 222364 |||| || || || ||||| || ||||| |||||| |||||| ||||| | Sbjct 1486 GACA--CCAATGCCGCCGGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCATAG 1543 Query 222365 ATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTG 222424 |||||||| || ||||| ||||| | | ||||| || || ||||||| ||| | Sbjct 1544 ATGCCCTCGATCGAGTCATCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGC 1603 Query 222425 GTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGA 222484 | | | |||||| |||||||| || | ||||| || ||| ||| ||||| Sbjct 1604 GGCGTGCCGGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTAC 1663 Query 222485 TCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATG 222544 ||||||||||| | | | |||||| | | ||| || | ||| | || Sbjct 1664 TCGTACGTCTCGAGCGCGGCGTCGATGTCATGCTTGTGGATGCCGACAGCGACGCGCAGA 1723 Query 222545 TACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTGGAG---AGCAGGTACGATTTT 222601 ||| | ||| || | || ||| ||||| | | | || |||||||| || Sbjct 1724 ATCATCTGCTGCGGGCGCT---CAGCGACCTTGCCACCGACGCGCAGGAGGTACGACTTC 1780 Query 222602 TCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTG 222648 || || |||||||| |||||||||| | |||||||| | | |||| Sbjct 1781 TCGAGCGTCTTGAAGCCAAAGTAGTCGTACTCAAAGTCGCGGTCGTG 1827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928675564477440