Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq422 205 1e-47 seq756 143 3e-29 seq3138 87.8 2e-12 >seq422 Length=12968 Score = 205 bits (226), Expect = 1e-47 Identities = 574/866 (66%), Gaps = 25/866 (3%) Strand=Plus/Minus Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 75187 || |||| ||| | | |||||||| |||| || || |||||| || || | || Sbjct 1821 CGCGACTTTGAGTACGACTACTTTGGCTTCAAGACGCTCGAGAAGTCGTACCTCCTGCGC 1762 Query 75188 CTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATC 75247 ||| ||||| || || ||| ||| | ||| | |||| ||||| |||||||| Sbjct 1761 GTCGGTGGCAAGGTCGCTGAGCGCCCGCAGCAGATGATTCTGCGCGTCGCTGTCGGCATC 1702 Query 75248 CACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTC 75307 ||| | | ||||| || | | | ||||| ||||| | ||||| ||| | | ||| Sbjct 1701 CACAAGCATGACATCGACGCCGCGCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTC 1642 Query 75308 ATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGC 75367 | ||||| || || || || ||||| || || || || | |||||| |||| ||| Sbjct 1641 ACGCACGCGACGCCGACGCTGTTCAACGCCGGCACGCCGCGCCCGCAGCTGTCGTCGTGC 1582 Query 75368 TTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGT 75427 ||||| |||||| ||||| ||||| ||| | || ||||||| || || | | |||| Sbjct 1581 TTCCTGCTCGCCATGAAGGATGACTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGC 1522 Query 75428 GCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAAT 75487 || ||||| |||||||| || || ||||| | | | || | | | || | Sbjct 1521 GCCTGCATCTCCAAGTGGGCCGGCGGCATTGGTGTCAGCGTGCACAACATCCGCGCGACC 1462 Query 75488 AAATCTCGT--ATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCG 75545 || ||||| || || || || || || || | || | | || ||||| |||| Sbjct 1461 AA--CTCGTACATCCGTGGCACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCG 1404 Query 75546 TATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG----TCGCAAGGGGTCCATC 75601 | || |||| ||| ||||| ||||| ||| || | |||| |||||||| || || Sbjct 1403 TGTTCAACGACACGGCGCGTTATGTGGATC-AGGGTGGCGGCAAGCGCAAGGGCTCGTTC 1345 Query 75602 GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGA-GTTACGACTCAA 75660 ||| | || | || || ||||| ||||| ||| | |||||||| || | | || || Sbjct 1344 GCGATGTATCTCGAGCCGTGGCACGCCGACATCTTCGAGTTCCTCGACCTCAAGA-AGAA 1286 Query 75661 CCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719 ||| || ||| || || | | | | | ||||| || | | |||||||||| || | Sbjct 1285 CCACGGCAACG-AGCTGCACCGCGCTCGTGATCTGTTCTACGCGATGTGGATTCCCGATC 1227 Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779 | ||||||||||| ||||||| || | ||| || ||||| || || |||||| Sbjct 1226 TCTTCATGAAGCGCGTTGAGGCCAACGGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCAC 1167 Query 75780 CAGGTCTCTCCGACG-CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG 75838 | ||||||| | ||| || |||||| ||||| || || || ||| |||| || Sbjct 1166 CGGGTCTCTAC-ACGACGTGGGGTGACGAGTTCGAGGCGCTGTACCACCAGTACGAGCGC 1108 Query 75839 GAGGGTAGAGC---CAATGCGA-CTGTAC-CAGCCGCCGATGTTTGGAAGGCTATTCTCA 75893 ||||| | || ||| ||| | | | |||| || | ||| || || ||| Sbjct 1107 GAGGGCCGCGCGCGCAAGACGATCCGCGCGCAGCAGC-----TCTGGTTCGCGATCCTCG 1053 Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953 | || |||| ||||| || || || || ||||| |||||||| | |||||| ||| Sbjct 1052 AGTCGCAGATCGAGACGGGCACGCCGTACATGCTGTACAAGGACTCGTGTAACCGCAAGT 993 Query 75954 GTAACCAAAAGAATTTGGGAACAATC 75979 ||||| |||| | || || ||| Sbjct 992 CGAACCAGCAGAACCTCGGCACGATC 967 >seq756 Length=9614 Score = 143 bits (158), Expect = 3e-29 Identities = 356/530 (67%), Gaps = 18/530 (3%) Strand=Plus/Minus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | || | || ||| | |||||||||| | ||||| | || |||| ||| Sbjct 2654 GCCATCGAGACGATCCCTTGTGTGCAGAAGAAGGCCCACTGGGCGCTCAAGTGGTGCGAC 2595 Query 65056 ACAAAGTCTCGCTCC-TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114 | | | ||| | ||||||||||| | | ||||| || || ||||| ||||| Sbjct 2594 TCGC-GCCGCGCCGCGTTCGCCGAGCGTATCGTCGCGTTCGCTGCCGTCGAGGGCATCTT 2536 Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 |||||| || || |||||| |||| | ||| | |||||||| || || ||||| ||||| Sbjct 2535 CTTCTCGGGCTCGTTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGCCT 2476 Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC---CGT 65231 ||||||| || || || || || || || |||||||||||| || || || | | Sbjct 2475 CAGCTTCTCGAACGAGCTCATCTCGCGTGACGAGGGTCTCCACTGCGACTTCGCGTGCCT 2416 Query 65232 GGAGCTCTTCAAGACTTTGCGTAATAGACCCACTACCGAAACT---ATCCACGCCATCGT 65288 | | || |||| | || | || || |||| || ||||||| ||| | Sbjct 2415 GCTGTACTCCAAG--CTCGCCAACAAGCTCC----CCGAGTCTCGCATCCACGAGATCAT 2362 Query 65289 GAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCAT 65348 || || || | ||| ||||| | |||| || |||| | ||||| | ||||| Sbjct 2361 TCGCGATGCTGTCGCGATCGAGAAGGAGTTCGTCCAGGACTCGCTCCCGGTGGAGCTCAT 2302 Query 65349 CGGTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTG-TCGGATCGTCTCCTCA 65407 |||||||||||| |||| | |||||||||||| | || | ||||| |||||| Sbjct 2301 CGGTATGAACTCGTCTCTCATGTGCCAGTACATTGAGT-TCTGCGCCGATCGCCTCCTCC 2243 Query 65408 AACAAGTTGG-GGTGCCACCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAAC 65466 | |||| | ||||| || | || | | ||| || || |||| ||||| | Sbjct 2242 ACGCGCTTGGCGTTGCCA-AGATCTACAAGGTGTCGAACCCGTTCGACTGGATGGACATG 2184 Query 65467 ATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 || || | || |||||||||||||| |||||||| || || || || Sbjct 2183 ATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGTA 2134 >seq3138 Length=2987 Score = 87.8 bits (96), Expect = 2e-12 Identities = 246/372 (66%), Gaps = 18/372 (5%) Strand=Plus/Minus Query 14421 AGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACC 14480 || ||||||| ||||| || || || | | ||| || | || | ||||||||||||| Sbjct 1879 AGAATGAAATTAAGGTTGCTCAGCTTGGTGGATACGTGTCCGAGCATTCTGCGTACCACC 1820 Query 14481 ATGGTGAAGT-ATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGGGTTCA 14539 | |||||| | || | ||| ||||||| | || |||| | || | ||| Sbjct 1819 ACGGTGAACAGAGTCTCAACGG-CACGATTATCAACATGGCCCAAGATTTTGTGGGAAGC 1761 Query 14540 AACAACATTAACCT----TCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTGG 14595 |||||||| | || ||| || || |||| |||||||| || || |||||| Sbjct 1760 AACAACATCCATCTGTTGTCTCCAAACG----GTCAGTTTGGTACTCGACTAGCGGGTGG 1705 Query 14596 TAAGGATGCTTCTCAGACGAGGTACATTTTCACAAAACTTACCAAGGAGGCTCGCAAGA- 14654 ||| ||||| | | | | ||||| || || || || | || | ||| || || Sbjct 1704 TAAAGATGCAGCATCGCCTCGTTACATCTTTACGAACCT---CGAGCAA-CTCACACGAC 1649 Query 14655 ---TCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGATGATGGACGCTCCA 14711 |||| || |||| |||| || | | | | || | ||||||||||||| || | Sbjct 1648 GCATCTTCGACCCTCTGGATAACGACAACTTGACATATCTCGACGATGATGGACAGTCGA 1589 Query 14712 TTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAATGGAACCGAGGGTA 14771 |||| || || | || | || | | ||||||| ||||| ||||| |||||||| Sbjct 1588 TTGAGCCTGAATGGTATGTTCCGATCATTCCAATGGCACTCGTCAATGGTGGCGAGGGTA 1529 Query 14772 TCGGTACGGGTT 14783 |||| ||||||| Sbjct 1528 TCGGCACGGGTT 1517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596460905018880