Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_021306.1 Length=75736 Score E Sequences producing significant alignments: (Bits) Value seq1720 181 5e-41 >seq1720 Length=5393 Score = 181 bits (200), Expect = 5e-41 Identities = 363/529 (69%), Gaps = 23/529 (4%) Strand=Plus/Minus Query 65198 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 65257 |||||| || || ||| | ||| | ||||||||| |||||| || | ||| | | Sbjct 5230 GCGCAGCAGCAAGGCGGCGTCTGCGCGTTCATCGACGCCGAGCACGCCATCGACGCGCAC 5171 Query 65258 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 65317 ||||||||| |||||| || || ||||| | ||| | ||||| ||| | ||| Sbjct 5170 TACGCCAAGCAGCTCGGCGTCAACATCGACGAGCTCTACATCTCGCAGCCCGACTCGGGC 5111 Query 65318 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCG 65375 |||||||| || ||||||| ||| || || ||| |||| | ||| | |||||| Sbjct 5110 GAGCAGGCGCTCGAGATCGCCGACACGCTTGTGCGGTCGGGCG--CCGTCGACGTCGTCG 5053 Query 65376 TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA-C 65434 |||| ||| || || || || ||||||||||||||||| |||||||| || || || | Sbjct 5052 TCGTCGACAGCGTCGCTGCGCTTGTGCCGCGCGCCGAGCTGGAAGGCGAGATGGGCGATC 4993 Query 65435 AGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACC 65494 || || ||| |||| ||||| |||||| ||||| ||||||||||||| || Sbjct 4992 AG-CAGATCGCGTTGCAGGCGCGGCTCATGAGCCAGGCGCTGCGCAAGCTCACGGG---- 4938 Query 65495 ATCTC-CAGCA---CCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGAT 65547 ||| | |||| |||| || ||| | ||| | |||||| | ||| |||| | Sbjct 4937 ATCGCTGAGCAAGTCCAACTGCATGCTCA---TCTTCCTGAACCAGATCCGCCAGAAAGT 4881 Query 65548 CGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTA 65607 || | | | || || || |||| ||| ||||||||| ||| || | | ||| Sbjct 4880 GGGTATCCT---CTTTGGTTCGCCCGAGGTCACGTCGGGCGGCACGGCGCTGCGCTACTA 4824 Query 65608 CGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGT 65667 ||| || || || | || | || |||| ||| | ||||||||||| ||| || Sbjct 4823 CGCGTCCGTGCGGCTCGACATTCGGCGCAAGGCCGCGATCAAGGAAGGCGACAAGGTCGT 4764 Query 65668 CGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCG 65716 ||||||| | | || ||||||| |||||||||||| || ||||| Sbjct 4763 CGGCAACGAGATCGTCGTCAAGGTCGCCAAGAACAAGCTCGCGTCGCCG 4715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242187368980592