Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq422 156 4e-33 seq170 111 1e-19 >seq422 Length=12968 Score = 156 bits (172), Expect = 4e-33 Identities = 407/612 (67%), Gaps = 13/612 (2%) Strand=Plus/Plus Query 139388 CGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAAT 139447 ||||||| |||| |||||| ||||||| ||||| |||||||||| ||| | | || || Sbjct 1197 CGCCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCACATCGCGTAGAACAGAT 1256 Query 139448 CGCGCGCCTTCTT-ATCTTCCGAACCCATGTTACGT-TTCATGTTAAGGAAATCAAAAAC 139505 | || || | | || || || || | | | || | || ||||| || || | Sbjct 1257 CACGAGCGCGGTGCAGCT--CGTTGCCGTGGTTCTTCTTGAGGTCGAGGAACTCGAAGAT 1314 Query 139506 GTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTGCC---ACCTTG 139562 ||| |||||||| || || ||||| || || | | ||| || || ||||| ||| || Sbjct 1315 GTCGGCGTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGCGCTTGCCGCCACCCTG 1374 Query 139563 ATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGT 139622 ||| || | || | | | ||||| ||||||| ||| ||| | || ||| ||| | Sbjct 1375 ATCCACATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCACGAGGCCGTTCGACGA 1434 Query 139623 TCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGAT 139682 ||||| |||| ||||||| |||| || |||| || || || ||| || || Sbjct 1435 GCCGTTCGTGCCACGGATGTACGAGTTGGTCGCGCGGATGTTGTGCACGCTGACACCAAT 1494 Query 139683 TCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAAT-GTCTCGTATATACCTCTTA 139741 |||||| | | ||||| || | |||| | || | | || || || || || | Sbjct 1495 GCCGCCGGCCCACTTGGAGATGCAGGCGCACT-GCTTGAGCGTGTCATAGATGCCCTCGA 1553 Query 139742 TGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGG 139801 | ||| |||| ||| | || ||| ||||| ||||| || ||||| | |||||||| Sbjct 1554 TCGAGTCATCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCGG 1613 Query 139802 CTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTT 139861 | ||||| || || ||||||||||||| | || |||||| | |||||||| | Sbjct 1614 CGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCGTACGTCT 1673 Query 139862 CGATGGCGCTCACAATATC--CCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919 ||| ||| | || || ||| |||||| ||||||| ||| |||| | ||| || Sbjct 1674 CGAGCGCGGCGTCGATGTCATGCTT--GTGGATGCCGACAGCGACGCGCAGAATCATCTG 1731 Query 139920 TTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTT 139979 || || || || ||| ||| ||| || || ||||| || ||||| Sbjct 1732 CTGCGGGCGCTCAGCGACCTTGCCACCGACGCGCAGGAGGTACGACTTCTCGAGCGTCTT 1791 Query 139980 GTAGCCAAAGTA 139991 | |||||||||| Sbjct 1792 GAAGCCAAAGTA 1803 >seq170 Length=18893 Score = 111 bits (122), Expect = 1e-19 Identities = 171/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||||| || || || |||||||| || || | | Sbjct 6457 GATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAGCCTTC 6516 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||| | || | || || || |||||||| ||||| || ||||| ||||| ||||| Sbjct 6517 GGACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCGGATCA 6576 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||| ||||| || ||||| ||||| | | | || || || || Sbjct 6577 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGACTACAA 6636 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 ||| || ||||| ||||| || ||| | ||| | || | || || || | | ||||| Sbjct 6637 CATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTTCGTGGTGGTGCCATCGAGCC 6696 Query 24943 AACG 24946 ||| Sbjct 6697 CACG 6700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449815628657280