Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq422 322 5e-83 seq170 143 3e-29 >seq422 Length=12968 Score = 322 bits (356), Expect = 5e-83 Identities = 716/1065 (67%), Gaps = 22/1065 (2%) Strand=Plus/Plus Query 148709 GAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAAT 148768 || ||| |||| |||| |||||||| ||||| || |||||| || ||||| || || Sbjct 772 GATCGGGTAGTAGTTGATGTCGATGACCTTGTTGAGGTTGCGCGTGACGACCTTGGTGAT 831 Query 148769 TCTGCGCAGCAATTCAAAATCGTA---CTTGTCATCTACGATGCATCGGTTCACGGCGAT 148825 | |||| | || ||| | |||||| || | | | || ||||| Sbjct 832 GTCGTACAGCTTCTTGAAGTCGAAGGTCTTGTCGTCGTTCACAAACTTGGACAGCGCGAT 891 Query 148826 AGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCA 148885 || || || |||||||| || ||| || || | ||||||| | | |||| ||| Sbjct 892 GGACGCGAGGTTGCACACCGCGACCTCGTCGGGCGACGTGTACTCGAGCACCTCGCAGCA 951 Query 148886 CAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTC 148945 || ||||| | |||| ||| | ||||| || || ||||| ||| |||| ||| Sbjct 952 GAGGTTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTACACGAGTC 1011 Query 148946 CTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATG 149002 |||||||||||||||||| ||| || || | ||||| || | || ||||| | Sbjct 1012 CTTGTACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAGAG 1071 Query 149003 CAGGTCCTGCGCGCGCA-CTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACA 149061 | | ||||||||| | | | ||| || ||| ||||| ||||||| |||| Sbjct 1072 CTG---CTGCGCGCGGATCGTCTTGCGCGC-GCGGCCCTCGCGCTCGTACTGGTGGTACA 1127 Query 149062 GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGA 149121 || ||||||| | || || | || |||||| || || || |||||| | | Sbjct 1128 GCGCCTCGAACTCGTCACCCCACGTCGTGTAGAGACCCGGTGCCTCGTTCGGGCAGAACA 1187 Query 149122 GCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGT 149181 | |||| |||||| || | ||||||||||| || |||||||| | ||| | ||||| Sbjct 1188 GGCTCCACTCGCCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCACATCGCGT 1247 Query 149182 ACATGAGGTCGCG--CGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCAC 149239 | | || || || ||| ||||| ||| ||| ||| |||| ||| | Sbjct 1248 AGAACAGATCACGAGCGCGGTGCAGC--TCGTTGCCGTGGTTCTTCTTGAGGTCGAGGAA 1305 Query 149240 GCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTGCC 149299 ||| ||||| |||||||||||||| | |||| ||||| || ||||||||||||||| Sbjct 1306 CTCGAAGATGTCGGCGTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGCGCTTGCC 1365 Query 149300 GCC---CTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCC 149356 ||| ||| || || | ||| || ||| ||| ||||| || | ||| || | | ||| Sbjct 1366 GCCACCCTGATCCACATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCACGAGGCC 1425 Query 149357 ACTGGCAGTGCCGTTAGTAGAGCTAATG--CGACTGCCGCGCGCTCGCACTTTGTGCACG 149414 | | | |||||| || | ||| ||| | ||||| | | ||||||||| Sbjct 1426 GTTCGACGAGCCGTTCGTGCCACGGATGTACGAGTTGGTCGCGC--GGATGTTGTGCACG 1483 Query 149415 TTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAG 149474 |||| || ||||||||| | |||| |||||| ||||| | |||||| ||| Sbjct 1484 CTGACACCAATGCCGCCGGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCATAG 1543 Query 149475 ATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAA 149534 ||||||||||| ||| |||||||| ||||| |||||||| ||| ||||| Sbjct 1544 ATGCCCTCGATCGAGTCATCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGC 1603 Query 149535 CGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATC 149594 |||||||||| ||||| || || | ||||| || || | | || ||| | Sbjct 1604 GGCGTGCCGGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTAC 1663 Query 149595 TCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATC 149654 ||||||| ||||||| || ||| ||||||| |||||||| | |||||||||| Sbjct 1664 TCGTACGTCTCGAGCGCGGCGTCGATGTCATGCTTGTGGATGCCGACAGCGACGCGCAGA 1723 Query 149655 AGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCT 149714 | ||| |||||||| ||||| || || ||| || | || | ||| || || Sbjct 1724 ATCATCTGCTGCGGGCGCTCAGCGACCTTGCCACCGACGCGCAGGAGGTACGACTTCTCG 1783 Query 149715 AGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGG 149759 || |||||| |||||||||| | ||| |||||||||||| ||||| Sbjct 1784 AGCGTCTTGAAGCCAAAGTAGTCGTACTCAAAGTCGCGGTCGTGG 1828 Score = 255 bits (282), Expect = 6e-63 Identities = 427/610 (70%), Gaps = 7/610 (1%) Strand=Plus/Plus Query 147957 AGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTAGTCGTGCACCGACGACATG 148016 || |||||||| ||||||||||| ||| | ||| |||||| ||||| |||| || Sbjct 1 AGGTAGTACATACCCGTCTTGAGACCCTTCTTCCACGCGTAGAAGTGCATGGACGTCAGC 60 Query 148017 AGCGTGTACGTCGGGTGCGGCACAAACAGATTAAACGACTGGCTCTGGTCAATGAACGCG 148076 || |||||| | || | || ||| | ||||||||||||| ||| | ||| Sbjct 61 TTGCTGATCGTCGGCTCCGCGATGTGCACATTGAGCGACTGGCTCTGGCAGATGTAGGCG 120 Query 148077 CCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCTTCATCTCCCAGGCCGTCTTGTAC 148136 || ||||| |||||||| || | | ||| ||| |||||||| ||||||||||| Sbjct 121 CCGCGGTCGGCGGCCATGTCGAGCACGGCCTTCTGCTTGATCTCCCACACCGTCTTGTAC 180 Query 148137 AGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCGAGCCGCGGT-GCGCAAA 148195 | ||| | ||| || || | | | |||||| |||||| ||| | ||| Sbjct 181 TTCTCCTTCACGGCATCCGGGATCACACGCACGTTCTGCACTGAGCCGTGGTCGTGCAGG 240 Query 148196 AATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCAGGTCATCGATCAGATA 148255 | |||| ||||||| ||| ||| | | | ||||||||| || || | ||||| || Sbjct 241 A-TCTGGTTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATCAGGTA 299 Query 148256 CTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAA 148315 || ||||| | | |||||||| || |||||||| || |||| |||| |||| || Sbjct 300 CTTGTTCACGATCGTGAACTCGCCTGCAAGCACGCGGCGGTTGTACATGTTGGTCGTGAA 359 Query 148316 CGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGC 148375 ||| || | ||||||||||||||| | ||||||||||||| ||||| ||||| ||| Sbjct 360 CGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCGGTCGACGCCGTCGGCATCGGCGC 419 Query 148376 TACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTC 148435 | ||||||||||||||||| ||| | | || ||| || || |||||||| Sbjct 420 GAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTGGCCTTGAGCGCGGCCCAGTC 479 Query 148436 CCAGAG--CGG-CGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGC 148492 |||||| ||| || ||| || ||| ||||||||||||||| | ||||| ||| | Sbjct 480 CCAGAGGCCGGACGTCGGCGTGACGCCCCACATGTCGTACTGGAAGATGCCCTTGCTCAC 539 Query 148493 GGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGC-TCGCCT 148551 ||| ||||||||| | |||||| |||||| || ||| || || || | |||| Sbjct 540 GGGTGAGCCCTCGTAGCTGGCGTACGGGCCGTGCTCCTTCGCGAGCTC-CATCGAGGCCT 598 Query 148552 CGAGCGCGCC 148561 | | |||||| Sbjct 599 CCATCGCGCC 608 >seq170 Length=18893 Score = 143 bits (158), Expect = 3e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | |||| |||||||||||||||||| Sbjct 6654 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCGAGCTGCTTGCCG 6595 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || || |||||||| || |||||||| || |||||||| |||||| |||||| Sbjct 6594 GCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGGATCTTCTGCTTG 6535 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | |||| |||| | ||||| ||||||| |||| || |||||||||||||| Sbjct 6534 ACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTGCCGGTCAGAGTC 6475 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 6474 TTGACGAAGATCTGCAT 6458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483332720730240