Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq875 111 2e-19 >seq875 Length=8764 Score = 111 bits (122), Expect = 2e-19 Identities = 182/257 (71%), Gaps = 8/257 (3%) Strand=Plus/Minus Query 142554 TCGTCACATCGTCA---CCGCGTGGAACCCTGCTGAAGTCGACGACATGGCACTTCCTCC 142610 ||||| |||| ||| | || ||||||||||| || || | || ||||| || || || Sbjct 6870 TCGTCGCATCATCATGTCGGCATGGAACCCTGCGGACCTCAAGGAGATGGCGCTGCCGCC 6811 Query 142611 GTGTCACATGATGTTCCAATTCCACGTCGACTCGAAGAAGCGTCTGTCATGCCAGCTGTA 142670 |||||||||| | | ||| ||| |||||| | | | | | || || |||||| |||| Sbjct 6810 GTGTCACATGTTCTGCCAGTTCTACGTCG--CCAACGGCGAG-CTCTCGTGCCAGATGTA 6754 Query 142671 TCAGCGTTCGGCAGACTGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCT 142730 ||||| || || ||| | |||||||| || || |||||||| || ||||| | Sbjct 6753 CCAGCGCTCAGCTGACATGGGACTCGGCGTGCCTTTTAACATTGCGAGCTATGCGCTGTT 6694 Query 142731 CACACAGCTCATTGCTCGCGAATGCGGTCTG-GAACTCGGAGACTTCGTCCACACCTTCG 142789 || | ||||| || | | || ||| | || ||||||||| ||||||| ||| Sbjct 6693 GACTCGACTCATCGCGCAGGTCACAGGGCTGCGTGCT-GGAGACTTCATCCACACGATCG 6635 Query 142790 GCAATTCGCACATCTAC 142806 || || ||||||||||| Sbjct 6634 GCGATGCGCACATCTAC 6618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500408009045760