Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq422 187 2e-42 >seq422 Length=12968 Score = 187 bits (206), Expect = 2e-42 Identities = 716/1097 (65%), Gaps = 42/1097 (4%) Strand=Plus/Plus Query 147321 GTTGCTGCGCTTCGCGCTCGCT-ATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGGT 147379 |||||| |||| || |||| || || |||| |||| || || | ||||||||||| Sbjct 751 GTTGCTTCGCTCGGC-CTCGGGGATCGGGTAGTAGTTGATGTCGATGACCTTGTTGAGGT 809 Query 147380 TACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCGA 147439 | ||| || || || || || | || |||| ||| || | ||| ||| ||| Sbjct 810 TGCGCGTGACGACCTTGGTGATGTCGTACAGCTTCTTGAAGTCGAAGGTCTTGTCGTCGT 869 Query 147440 -CACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGG-C 147497 ||| || |||| || ||||| ||||| || ||||| || || ||| |||| | Sbjct 870 TCACAAAC---TTGGA-CAGCGCGATGGACGCGAGGTTGCACACCGCGACCTCGTCGGGC 925 Query 147498 GTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTG 147557 | || |||||| | | ||| ||| |||||||| | || || | || || Sbjct 926 GACG-TGTACTCGAGCACCTCGCAGCAGAGGTTGCTCGAGCGGATCGTGCCGAGGTTCTG 984 Query 147558 CTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGAC 147617 ||| || || || || |||| ||| ||| | ||||||||||| ||| ||||||| Sbjct 985 CTGGTTCGACTTGCGGTTACACGAGTCCTTGTACAGCATGTACGGCGTGCCCGTCTCGAT 1044 Query 147618 TTGCGTTTCAACGATA---AACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCG 147674 |||| || | ||| |||| || | |||||| || | | || || ||| Sbjct 1045 CTGCGACTCGAGGATCGCGAACCAGAGCTG---CTGCGCGCGGATCGTCTTGCGCGCGCG 1101 Query 147675 GCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCG-GCA- 147732 ||||||| |||||| | | ||||| | ||| |||||||| || | ||| | | Sbjct 1102 GCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAACTCGTCACCCCACG--TCGTGTAG 1159 Query 147733 AGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGC 147792 || || || || | ||| || | ||| |||| | ||| || | |||||| | Sbjct 1160 AGACCCGGTGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCTCAACGCGCTTC 1219 Query 147793 ATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCG--CGCTTTGCAATCCTCGG 147850 || || ||||| || | ||||| |||||| | ||||| || ||| |||| |||| Sbjct 1220 ATGAAGAGATCGGGAATCCACATCGCGTAGAACAGATCACGAGCGCGGTGCAG--CTCGT 1277 Query 147851 CGCCCATGTTGCGTTTCAAATTAAGCA-CGCTATAGATGTCGGCGTGCCAGGGTTCAATG 147909 ||| ||| || | | || | | | | |||||||||||||||| || || | Sbjct 1278 TGCCGTGGTTCTTCTTGAGGTCGAGGAACTCGA-AGATGTCGGCGTGCCACGGCTCGAGA 1336 Query 147910 TAGACGGCCAGCGCACCTTTACGCTTTCCG---CCCTGGTCGACATGGCGCACCATGTTG 147966 || | || | || || || ||||| ||| ||||| || |||| ||| || ||| | Sbjct 1337 TACATCGCGAACGAGCCCTTGCGCTTGCCGCCACCCTGATCCACATAACGCGCCGTGTCG 1396 Query 147967 TTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCTTG 148026 || |||||||||| |||||| | |||||| ||| | |||||| ||| | ||| | Sbjct 1397 TTGAACACGCGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGCCACGGATGTAC 1456 Query 148027 CTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATG 148086 | | || || | | ||||||| | || |||||||||||| | |||| || ||| Sbjct 1457 GAGTTGGTCGCGCGGATGTTGTGCACGCTGACACCAATGCCGCCGGCCCACTTGGAGATG 1516 Query 148087 GCAGCGCAATCGCCCAA---TGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCCA 148143 ||||| | || | |||| |||||||| ||||| ||| | || | | | Sbjct 1517 CAGGCGCACT-GCTTGAGCGTGTC--ATAGATGCCCTCGATCGAGTCATCCTTCATGGCG 1573 Query 148144 AGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTC 148203 |||| || ||||| ||| ||||| | |||| || || ||| || || || || Sbjct 1574 AGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCGGCGTTGAACAGCGTCGGCGTC 1633 Query 148204 GCGTGCGTAAACAATTTTTGACTCAT-CATGCGATACGTCTCAATAGCGTCTTCGATGTC 148262 |||||||| || || |||| ||| | || |||||||| | ||| | |||||||| Sbjct 1634 GCGTGCGTGAAGAAGCTTTGCGACATGTACTCG-TACGTCTCGAGCGCGGCGTCGATGTC 1692 Query 148263 GTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGC-AACTT 148321 | ||| ||||| | |||||||||| | ||| ||||| || || || || | ||| Sbjct 1693 ATGCTTGTGGATGCCGACAGCGACGCGCAGAATCATCTGCTGCGGGCGCTCAGCGACCTT 1752 Query 148322 G--ATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTA 148379 | | | | | || || || || ||||| || ||| | |||||||| | ||| Sbjct 1753 GCCACCGACGCGC---AGGAGGTACGACTTCTCGAGCGTCTTGAAGCCAAAGTAGTCGTA 1809 Query 148380 ATCAAAATCTAGCTCGT 148396 ||||| || | |||| Sbjct 1810 CTCAAAGTCGCGGTCGT 1826 Score = 107 bits (118), Expect = 2e-18 Identities = 347/525 (66%), Gaps = 13/525 (2%) Strand=Plus/Plus Query 146593 TAATACATGCCCGTTTTGAGGCCACATCG-CCACGAGTGATTGTGAATCGAAGTCATGAT 146651 || ||||| ||||| ||||| || | || ||||| || ||| || || |||| | Sbjct 4 TAGTACATACCCGTCTTGAGACC-CTTCTTCCACGCGTAGAAGTGCATGGACGTCAGCTT 62 Query 146652 GGCGTACGTCGGCTCCGCCACGAAAAGATTAAACGATTGGCTTTGATCTATGAAAGCGTT 146711 | | |||||||||||| | | | ||| | ||| ||||| || ||| | ||| Sbjct 63 GCTGATCGTCGGCTCCGCGATGTGCACATTGAGCGACTGGCTCTGGCAGATGTAGGCGCC 122 Query 146712 GCGGTCGGCCGCCATCTCAATCA-TGCGTTTTGTCTTCATTTCCCAAGCGGTTTTGTACA 146770 ||||||||| ||||| || | || || || || ||| || ||||| | || |||||| Sbjct 123 GCGGTCGGCGGCCATGTCGAGCACGGCCTTCTG-CTTGATCTCCCACACCGTCTTGTACT 181 Query 146771 GCCCCTTAACGCTATCTGGAATACCTTCAATGTTTTGAATAGAGCCCTTGT-GCGCAAAA 146829 | |||| ||| ||| || || | | ||| || | ||||| | || | || | Sbjct 182 TCTCCTTCACGGCATCCGGGATCACACGCACGTTCTGCACTGAGCCGTGGTCGTGC-AGG 240 Query 146830 ATAGTGTTTCGTATTTCGGGCGTGTAAAGGTTTAGTTTAATGAGGTCATCAATTAAATAC 146889 || ||| || | |||||||| | | | || | ||||| || | || | ||| Sbjct 241 ATCTGGTTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATCAGGTAC 300 Query 146890 TGATTGACCA-CTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAA 146948 | || || | | || |||||||| || ||||| || | | |||| ||| | ||||| Sbjct 301 TTGTTCACGATCGTG-AACTCGCCTGCAAGCACGCGGCGGTTGTACATGTTGGTCGTGAA 359 Query 146949 AGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGC 147008 ||||| | ||||| || ||||| | || || || || | || || ||||| ||| Sbjct 360 CGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCGGTCGACGCCGTCGGCATCGGCGC 419 Query 147009 CACCAACAATGAATTTCGCAGACCGTAC-GCACGGATGTTGTCCTTCAAAGTTTGCCAGT 147067 | || || || || |||| |||||| || | || | || |||| | | ||||| Sbjct 420 GAGCAGCAGCGAGTTGCGCACGCCGTACTGCGC-GACGCTGGCCTTGAGCGCGGCCCAGT 478 Query 147068 CCCACA---TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGA 147109 |||| | |||| ||||| ||| ||||||||||||||||| Sbjct 479 CCCAGAGGCCGGACGTCGGCGTGACGCCCCACATGTCGTACTGGA 523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476524361439360