Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq875 228 9e-55 >seq875 Length=8764 Score = 228 bits (252), Expect = 9e-55 Identities = 332/461 (72%), Gaps = 6/461 (1%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||| ||| | ||||| | || ||| | | | | ||||||| || || || ||||| Sbjct 6550 ATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCACA 6609 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 ||||| | ||||| |||||| || || | ||||| | ||||| || | || || Sbjct 6610 TGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCT 6669 Query 146992 GTCACGTGGGCCACCATGTAG-GTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || || || || | | || | || | ||||| ||||| || ||||| || || || || Sbjct 6670 GTGACCTGCGCGATGA-GTCGAGTCAACAGCGCATAGCTCGCAATGTTAAAAGGCACGCC 6728 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTA 147110 || |||||||| | || | |||||||| ||||||||||||||| |||| ||| ||||| Sbjct 6729 GAGTCCCATGTCAGCTGAGCGCTGGTACATCTGGCACGAGAGCTCGCCGTTGGCGACGTA 6788 Query 147111 AAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCA 147170 |||||||| | ||||| ||||||||||||||||| | |||||||| |||||||| Sbjct 6789 GAACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCA 6848 Query 147171 GGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 ||||| | | | || | | || | |||||| |||| | || | || ||| | Sbjct 6849 TGCCGACATGATGATGCGAC-GATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCG 6907 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCA 147288 |||||||| || ||||||||| |||| | | | ||| | | |||| |||| ||| Sbjct 6908 CTAGCTGGTCGACTCCCTGGCCCGAGTAG-TCGGCGTGCATGGTCGTGTACTTGGCACCA 6966 Query 147289 AAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCC 147329 ||||| | |||||||||||| |||||||| || || ||||| Sbjct 6967 AAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCC 7007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583381688486400