Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq170 127 2e-24 seq422 123 3e-23 >seq170 Length=18893 Score = 127 bits (140), Expect = 2e-24 Identities = 163/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| ||||| || ||||| || ||||||||||| | ||| | Sbjct 6675 AGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGG 6616 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || |||| ||||||||||| || || || || || Sbjct 6615 CCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCC 6556 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || ||||| || ||||| |||| || | || |||||||| || Sbjct 6555 TTGTCCTGGATCTTCTGCTTGACATTGT-CAATGCTGTCCGAAGGCTCGACGTCGAGCGT 6497 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| | ||| || ||||| || ||||| || Sbjct 6496 GATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATCTT 6455 >seq422 Length=12968 Score = 123 bits (136), Expect = 3e-23 Identities = 559/863 (65%), Gaps = 45/863 (5%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || || ||| | ||||||| || || ||||| ||| | ||||| |||||||| | Sbjct 1734 CAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCACAAGCATGACATCGACGCCGCGCTC 1675 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTT----ACGCACGCTTCGCCCACCATGTT 7679 || |||||| | ||||| | || || || |||||||| |||| || |||| Sbjct 1674 GAGACGTACGAGTACATGTC---GCAA-AGCTTCTTCACGCACGCGACGCCGACGCTGTT 1619 Query 7680 TGCCGCGGGCACAAACGCGCCT-CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAG 7738 ||| ||||| |||||| || |||| ||||| || |||| ||||| || | Sbjct 1618 CAACGCCGGCACGC-CGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGATG 1560 Query 7739 ACAGCATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCG 7798 || ||||| ||||| || ||||||| | |||||| || ||||| | | || Sbjct 1559 ACTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCCG 1500 Query 7799 GCGGAATAGGTCTGAACGTAAACGACGTGCGCGC---CAACG-GTAGCCGCATC-GTGTC 7853 |||| || ||| | | ||| || || | ||||| |||| ||| |||| ||| | Sbjct 1499 GCGGCATTGGTGTCAGCGTGCACAACATCCGCGCGACCAACTCGTA----CATCCGTGGC 1444 Query 7854 CACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCG 7913 || ||||| | | ||| | | ||||||| ||||||||||||| || ||| ||| Sbjct 1443 -ACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGTTCAACGACACGGCGCG 1385 Query 7914 ACATGTAGACCAG---GGGGGAAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTG 7970 |||| || ||| || || |||||||| ||| | || || ||| | |||||||| Sbjct 1384 TTATGTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTATCTCGAGCCGTG 1325 Query 7971 GCACGCGGACATTTACGCAGTGCTAAATCT-GCGTCGCAACATGGGTTGCGAAGA-CAGC 8028 |||||| ||||| | || | || | || | | | || | || | || | || Sbjct 1324 GCACGCCGACATCTTCGAGTTCCTCGACCTCAAGAAGAACCACG----GCAACGAGCTGC 1269 Query 8029 AAAGCG--CGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTC 8086 | ||| || ||||| |||| || ||||| | |||||||| || |||| ||||||| Sbjct 1268 ACCGCGCTCGTGATCTGTTCTACGCGATGTGGATTCCCGATCTCTTCATGAAGCGCGTTG 1209 Query 8087 ATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCC---TTTATTAAAAAACG 8143 | | ||| | ||| || | || ||||| || || | | || | ||| Sbjct 1208 AGGCCAACGGCGAGTGGAGCCTGTTCTG-CCCGAACGAGGCACCGGGTCTCTACACGACG 1150 Query 8144 TTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGC 8203 | ||| | || || ||||| | || ||||| | ||| ||| || || || Sbjct 1149 --TGGGGTGACGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGC-CG--CGCGC 1095 Query 8204 GGCAAGTGAAAGCGCGCG-ACCTGCACCG---CGCCATTATCGAATGTCAAAACGAAACC 8259 ||||| | |||||| | | || | | ||| || |||| | || | ||| || Sbjct 1094 -GCAAGACGATCCGCGCGCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACG 1036 Query 8260 GGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTG 8319 || | |||||||||||||||||| ||| | || ||| ||| || || ||| | Sbjct 1035 GGCACGCCGTACATGCTGTACAAGGACTCGTGTAACCGCAAGTCGAACCAGCAGAACCTC 976 Query 8320 GGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAA 8379 ||||| || | | ||||| || ||| || | | |||||| |||||||||| Sbjct 975 GGCACGATCCGCTCGAGCAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCGACGAG 916 Query 8380 GTGGCCGTTTGCAATCTAGCGTC 8402 || || || ||||| || ||||| Sbjct 915 GTCGCGGTGTGCAACCTCGCGTC 893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505306316411520