Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq422 259 6e-64 seq756 196 6e-45 seq327 87.8 2e-12 >seq422 Length=12968 Score = 259 bits (286), Expect = 6e-64 Identities = 575/848 (68%), Gaps = 25/848 (3%) Strand=Plus/Plus Query 118791 ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTAT 118850 || ||||| | ||||| || || ||||| |||||||| |||||||| |||||||| Sbjct 968 ATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTACACGAGTCCTTGTACAGCATGTAC 1027 Query 118851 GGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTG-GCAC 118909 ||||| |||||||| | || |||| ||| || || ||||| || |||| || | Sbjct 1028 GGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAGA-----GCTGCTGCGCGC 1082 Query 118910 AG-TGGCGTTG---GCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTT 118965 | | | ||| || || ||||| |||||||| ||| || || || ||||| | Sbjct 1083 GGATCGTCTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAGCGCCTCGAACTCGT 1142 Query 118966 CACCC-ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 119024 ||||| ||| | | | |||| || ||||||| | |||||||| || ||| | || Sbjct 1143 CACCCCACGTCGTGT-AGAGACCCGGTGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCG 1201 Query 119025 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 119084 ||||||| |||||||||||||| || || ||||| | ||| |||| ||||| ||| Sbjct 1202 TTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCACATCGCGTAGAACAGATCACGA 1261 Query 119085 CAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 119143 ||| || || | | || || || | || | || || | ||| || || Sbjct 1262 GCGCGGTGCAGCT-CGTTGCCGTGGTTCTTCTTGAGGTCGAGGAACTCGAAGATGTCGGC 1320 Query 119144 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGACCAGCCTGGTTTAC 119200 ||||||||| || || |||| ||||| || ||||| || | ||| |||| | || Sbjct 1321 GTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGCGCTTGCCGCCACCCTGATCCAC 1380 Query 119201 ATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATT 119260 ||| | ||| ||| |||| || || || ||||| || | || || | || ||| || Sbjct 1381 ATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTT 1440 Query 119261 TGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCC 119318 || || || || ||||| || | || | || | ||| | | | |||||| || Sbjct 1441 CGTGCCACGGATGTACGAG--TTGGTCGCGCGGATGTTGTGCACGCTGACACCAATGCCG 1498 Query 119319 CCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAG 119378 || |||||||| ||||| ||||||| | |||| || | ||||| || ||||||||| Sbjct 1499 CCGGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCATAGATGCCCTCGATCGAG 1558 Query 119379 TCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTG 119438 ||| |||| | |||| |||||||| ||||| || || | || || || |||||| Sbjct 1559 TCATCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCGGCGTGCCGGCGTTG 1618 Query 119439 AAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAG 119498 || || || || |||||||| |||| | | ||| ||||| | ||||| ||||| | Sbjct 1619 AACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACTCGTACGTCTCGAGC 1678 Query 119499 ACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTG-GGG 119557 ||||| ||||| | | ||| || |||| | ||| |||| || ||| | || ||| Sbjct 1679 GCGGCGTCGATGTCATGCTTGTGGATGCCGACAGCGACGCGCAGAATCATCTGCTGCGGG 1738 Query 119558 TGTTTCCATC-AGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGAC 119616 | | || | | | ||| ||| | | ||||||| |||||| | ||||||| | Sbjct 1739 CGCT--CAGCGACCTTGCCACCGACGCGCAGGAGGTACGACTTCTCGAGCGTCTTGAAGC 1796 Query 119617 CAAAATAG 119624 |||| ||| Sbjct 1797 CAAAGTAG 1804 >seq756 Length=9614 Score = 196 bits (216), Expect = 6e-45 Identities = 400/584 (68%), Gaps = 24/584 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || ||||||||||||||||| ||||| || | | ||| | ||||| Sbjct 2134 TACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATC 2193 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCA-CTCCAATCTGTTTGAGGAGACG 129846 | || || |||||| || | || ||||| | |||| | | |||||| || Sbjct 2194 CAGTCGAACGGGTTCGACACCTTGTAGATCT-TGGCAACGCCAAGCGCGTGGAGGAGGCG 2252 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | | | |||||||||||| |||| ||||||||||||||||| | Sbjct 2253 ATCGGCGCAGAACTCAATGTACTGGCACATGAGAGACGAGTTCATACCGATGAGCTCCAC 2312 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||||| |||| || |||| ||||||| || | ||||| || || | ||| |||| Sbjct 2313 CGGGAGCGAGTCCTGGACGAACTCCTTCTCGATCGCGACAGCATCGCGAATGATCTCGTG 2372 Query 129967 AATG---GTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC-GGCA---- 130018 ||| | ||| | | || | | ||| || |||| |||| | | |||| Sbjct 2373 GATGCGAGACTCGGGG--AGCTTGTTGGCG---AG-CTTG--GAGTACAGCAGGCACGCG 2424 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||||||||| |||||||| || |||||||||| || || ||| Sbjct 2425 AAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGCTGAGGCCAGGC 2484 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||| | |||||| || | || || ||||| ||||||||||| ||| Sbjct 2485 ATAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCGAGAAGAAGATGCCC 2544 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAA---GGAGCGGGACTTTGTATCAAAC 130195 || || |||||||| | || |||||| || || || |||| | | || || Sbjct 2545 TCGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGGCGC---GAGTCGCAC 2601 Query 130196 CACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG 130255 ||||| | |||||| || ||||| |||| | ||| |||| |||| ||| || | Sbjct 2602 CACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCGATGGCGCGGAGA 2661 Query 130256 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 130299 || | ||||| || | | || ||||||||| | || ||||| Sbjct 2662 AGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAG 2705 >seq327 Length=14399 Score = 87.8 bits (96), Expect = 2e-12 Identities = 280/426 (66%), Gaps = 15/426 (4%) Strand=Plus/Plus Query 14050 CACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAAT 14109 ||| || |||| |||||| || ||||| || || || | ||| | ||| || || || | Sbjct 2047 CACAGTAATCTGACGATCGAAACGACCCGGACGAAGAATGGCCTTGTCGAGAATGTCGAC 2106 Query 14110 GCGGTTCGTCGCCGCGATGACAACGATGCCCGT-CTCGTTATCAAAGCCATCCATCTCAG 14168 |||||||| |||| | ||||| | |||| |||| | || ||| |||||||| | Sbjct 2107 ACGGTTCGTACCCGCAAGCACAACCACGCCCTCGCTCGAGTTGAA-GCCGTCCATCTC-G 2164 Query 14169 TCAAG-AGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCAC----CCGC 14223 | || || || |||| || | || || || ||||| || || | || || Sbjct 2165 ACGAGCAGCTGGTTGAGTGTGTTCTCTCGCTCGTCATTACCAC-CAGAGAACGTTCCCTT 2223 Query 14224 ACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTC 14283 ||| ||| | |||| || || |||||||||||||| || || || || ||| | Sbjct 2224 ACTACGTGCACGAGCGACAGCATCGATTTCATCGATGAAGACAATGCACGGAGAGTTTGC 2283 Query 14284 ACGGGCAACTTCA---AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTC 14340 || | ||||| || | ||| ||||| | | | ||| ||||| ||||||||||| Sbjct 2284 CCG---AGCTTCACGGAACAAATCACGCACACGCGACGGACCCACACCGACAAACATCTC 2340 Query 14341 CACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCG 14400 | |||| | | | ||| || ||| || || ||| |||||| || | || Sbjct 2341 AATGAAATCCGAGCCCGAAATACTGAAGAATGGCACACTAGCTTCACCAGCCGTTGCCTT 2400 Query 14401 GGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCT 14460 || || |||||||| || || || || || | || |||||||| |||||| | Sbjct 2401 CGCAAGCAGGGTCTTACCAGTGCCCGGAGGTCCGACAAGCAGGGCACCCTTCGGGATCTT 2460 Query 14461 GGCACC 14466 ||||| Sbjct 2461 AGCACC 2466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618322521106560