Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq422 219 5e-52 seq756 145 9e-30 seq2220 95.1 1e-14 >seq422 Length=12968 Score = 219 bits (242), Expect = 5e-52 Identities = 502/745 (67%), Gaps = 13/745 (2%) Strand=Plus/Minus Query 104221 CCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGT 104280 ||| ||| | ||| | ||||||| || |||| || || | | ||||| || | | Sbjct 1738 CCCGCAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCACAAGCATGACATCGACGCCGC 1679 Query 104281 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||||| | ||||| ||| | | |||| ||||| || || || || || Sbjct 1678 GCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCGACGCCGACGCTGTT 1619 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| || || || || | || || |||| |||||||| |||||| ||||| || Sbjct 1618 CAACGCCGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGATGA 1559 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| | || ||||||| || || | | |||| || ||||| |||||||| || Sbjct 1558 CTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCCGG 1499 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACA 104518 || ||||| | | | || | | | || | || |||||| | || || || Sbjct 1498 CGGCATTGGTGTCAGCGTGCACAACATCCGCGCGACCAA--CTCGTACATCCGTGGCACG 1441 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 || || || | || | | || ||||| ||||| || |||| ||| ||||| ||| Sbjct 1440 AACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGTTCAACGACACGGCGCGTTAT 1381 Query 104579 GTAAATCAAGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 || |||| | ||| | || ||||| || |||| | ||||| ||||| |||||| Sbjct 1380 GTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTATCTCGAGCCGTGGCAC 1321 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 || || ||| | |||||||| || | ||||| || ||||| | | | | || Sbjct 1320 GCCGACATCTTCGAGTTCCTCGACCTCAAGAAGAACCACGGCAACGAGCTG-CACCGCGC 1262 Query 104696 -CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 || ||||| |||| ||| | |||||||| ||||||||||||||| | ||||||| | Sbjct 1261 TCGTGATCTGTTCTACGCGATGTGGATTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAA 1202 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGT-GGGTG 104813 ||| | ||| || || || || || ||||||| ||||||| | | | ||| ||||| Sbjct 1201 CGGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCACCGGGTCTCTAC-ACGACGTGGGGTG 1143 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 | ||||| || || || ||| |||||||| || || || ||| |||| | | Sbjct 1142 ACGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGATCC 1083 Query 104874 CAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 || || | | | ||| || || ||| |||| || | |||||| || || || ||| Sbjct 1082 GCGC-GCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACGGGCACGCCGTAC 1024 Query 104933 ATGCTTTACAAAGACGCCTGTAACC 104957 ||||| ||||| ||| | ||||||| Sbjct 1023 ATGCTGTACAAGGACTCGTGTAACC 999 >seq756 Length=9614 Score = 145 bits (160), Expect = 9e-30 Identities = 198/274 (72%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 94731 ||||| |||| ||| || ||||| | |||||||| || || | |||||| | Sbjct 2705 CTCATCGACACGTACATCAAGGACCAGACCGAGAAGAACCACCTTCTCCGCGCCATCGAG 2646 Query 94732 ACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 94791 || | || ||| | || ||||| || | ||||| | ||||||| || | | || Sbjct 2645 ACGATCCCTTGTGTGCAGAAGAAGGCCCACTGGGCGCTCAAGTGGTGCGACTCGC-GCCG 2587 Query 94792 CGTTCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 || | || || ||||| || |||| || || || ||||| ||||||||||| || Sbjct 2586 CGCCGCGTTCGCCGAGCGTATCGTCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGG 2527 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 || |||||| |||| | |||||||||||||| || || ||||| || ||| ||||||| Sbjct 2526 CTCGTTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGCCTCAGCTTCTC 2467 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||||| ||||| ||||||||||| |||||| Sbjct 2466 GAACGAGCTCATCTCGCGTGACGAGGGTCTCCAC 2433 >seq2220 Length=4288 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 169312 GAGCTGTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACC 169371 |||||| | | | | || ||||| || ||| ||| ||||| || ||||||||||| Sbjct 2515 GAGCTGGGCGTCCGTCGCGTCGCGTACGTTCAGCACCTTGCCACGCAGCGGGAAGACACC 2574 Query 169372 GTAGTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACC 169431 ||| | || || |||||||| | ||| |||||||||||||| | ||| || ||||| || Sbjct 2575 GTACTTGTCGCGTCCAACGACCGCGAGTCCCGCGACTGCGAGCGCCTTGGCTGAGTCGCC 2634 Query 169432 CTCGGTGACGATGAGCG 169448 || |||| ||| |||| Sbjct 2635 TTCCGTGAGGATCAGCG 2651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583154529882240