Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq170 84.2 2e-11 >seq170 Length=18893 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/223 (69%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || ||||| ||| || || || || || || | || || || | Sbjct 6673 GCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCC 6614 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || |||||||| || | || | | ||| || Sbjct 6613 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTT 6554 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCG-TATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||||| |||| | | | || | | || | ||| ||||| | ||||| Sbjct 6553 GTCCTGGATCTTCTGCTTGA-CATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGA 6495 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 | | || || ||||| || || || ||||| ||||||||||| Sbjct 6494 TCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATCTTTAC 6452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429469293371888