Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq875 149 5e-31 seq2106 82.4 6e-11 >seq875 Length=8764 Score = 149 bits (164), Expect = 5e-31 Identities = 219/309 (71%), Gaps = 6/309 (2%) Strand=Plus/Plus Query 29634 CGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGT 29693 ||||||||| | | ||||||||||| |||| | ||||| ||| ||||| || | |||| Sbjct 6584 CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGT 6643 Query 29694 GGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGT 29753 ||| || ||||| | ||||| ||||| || || || | || | || | | Sbjct 6644 GGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCAACAGCGCAT 6703 Query 29754 AGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGC 29813 |||| || |||||||| ||||| ||||| |||||||| |||| | |||||| | ||||| Sbjct 6704 AGCTCGCAATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGGC 6763 Query 29814 ACGAGAGCTCTCCGTCGCTCACGTAAAACTGAC---ACATGGCATGGCACGGAGGAAGGG 29870 |||||||||| |||| | ||||| ||||| | ||||| || ||||| || || | Sbjct 6764 ACGAGAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATG---TGACACGGCGGCAGCG 6820 Query 29871 CCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTGGGT 29930 |||| | ||| |||||||| || ||| ||||||||| | || | ||||| Sbjct 6821 CCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGTTTGGGT 6880 Query 29931 TGTTCCTGA 29939 | || ||| Sbjct 6881 TCGTCTTGA 6889 >seq2106 Length=4523 Score = 82.4 bits (90), Expect = 6e-11 Identities = 112/151 (74%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 53525 CCAGAGATGGGCGACAAGTTT-GCATCCTTCACGGCGCAAAAGGGGACATGCGGAGCGGT 53583 || ||||| ||||||||||| ||| | |||||| || ||||| ||||| || | Sbjct 3352 CCCGAGATCGGCGACAAGTTCAGCAGTCGCCACGGC-CAGAAGGGCGTGTGCGGCACGAT 3410 Query 53584 CCTGACTCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCC-GACCTCATCATCA 53642 || | |||||||||||||| ||| || | ||||| || |||||| ||||| ||||| | Sbjct 3411 CCGCAACCAGGAGGACATGCCGTTCAACGACGACGGCGT-GTGCCCGGACCTGATCATGA 3469 Query 53643 ACCCCCACGCCTTTCCCTCCAGGATGACGGT 53673 |||| |||| || || | | |||||||| Sbjct 3470 ACCCGCACGGTTTCCCGAGCCGCATGACGGT 3500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406091047138336