Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq875 170 1e-37 >seq875 Length=8764 Score = 170 bits (188), Expect = 1e-37 Identities = 444/672 (66%), Gaps = 5/672 (1%) Strand=Plus/Plus Query 27003 CATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTT 27062 |||| |||| | || | | |||||| | |||||| ||||| ||| ||||| Sbjct 6456 CATCGCCATCTTGATCGTGCCATGAGGCTTGTAACCTTCCAGCTCGAAGTCCTCGAAGAC 6515 Query 27063 AAAGTCGTCCAGGCTCTCCACCCTC-CTG--TTTATCCTCAGTGT-GGGAAAGGGTCTGG 27118 ||| || || | ||| | | || ||| || ||| |||| || ||||||| || Sbjct 6516 AAACTCATCGATGCTGTTGGTCTTCTCTGGGTTGATCTTCAGCGTCGGGAAAGCCCGCGG 6575 Query 27119 GCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTC 27178 | | | | |||||||| ||| ||||||||||| || | || ||||| ||| || || | Sbjct 6576 GGTGCGGC-CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGC 6634 Query 27179 CCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGA 27238 | | ||||||| || ||||| | ||||| ||||| || || || | || | Sbjct 6635 CGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCA 6694 Query 27239 GGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGT 27298 || | ||||| || |||||||| || || ||||| |||||||| | || | ||||| Sbjct 6695 ACAGCGCATAGCTCGCAATGTTAAAAGGCACGCCGAGTCCCATGTCAGCTGAGCGCTGGT 6754 Query 27299 AGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAG 27358 | | ||| ||||||||||| || | | ||||| ||||| || | ||| ||||| | Sbjct 6755 ACATCTGGCACGAGAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGCG 6814 Query 27359 GAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTT 27418 | || ||||| | ||| |||||||| || ||| ||||||||| | || | Sbjct 6815 GCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCGT 6874 Query 27419 CTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 27478 |||||| || ||| || | | | | ||||| || || ||| ||||||| Sbjct 6875 TTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCTAGCTGGTCGACTCCCTGGCCCGAGT 6934 Query 27479 AGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCG 27538 |||| | |||| |||||||| || || || || | ||| ||||| || ||||| | Sbjct 6935 AGTCGGCGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAGCCATACACTG 6994 Query 27539 GTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAAC 27598 |||| || || || |||| | || ||| || | | |||| | || |||| | Sbjct 6995 GTCCGAGATCGCCAGCTTCACGATGTCCGAGACCGATGCTTTCCAGGTATTCCTTGGATC 7054 Query 27599 CGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTC 27658 | ||| | ||||| || | | ||||| || | | |||| ||||||| || | Sbjct 7055 CATTGCCATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTTGTGTCGCCAC 7114 Query 27659 TGACGAACCACA 27670 ||| |||||||| Sbjct 7115 TGATGAACCACA 7126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369441558893456