Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq2671 104 9e-18 >seq2671 Length=3584 Score = 104 bits (114), Expect = 9e-18 Identities = 188/273 (69%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064 ||||||||||||| ||||| ||||| || | ||||| | || | | | | | Sbjct 2474 CCATGCACATGTGCGTCGCCTCGATGACGACGGCCACGCCTTGGGGCTGGATGACGCCCA 2533 Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCG--GCGAGCATA 31122 | |||| ||||||||| | || || || |||||||||||||| || ||||| | | Sbjct 2534 TGATCGCGTTCGCGATCTGCTTCGTCAGTCGCTCCTGCACTTGCAGTCGTCGCGAGAAGA 2593 Query 31123 CATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTAGCT 31182 | || | | ||| | ||||||||||| || | | |||||||| ||||||| Sbjct 2594 C--CTCTGAGATGCGCGCGAGCTTGCTCAGACCGAGCACCTTGCCGTTCGGGATGTAGCC 2651 Query 31183 GATCGTGACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGGGGAT 31242 || |||| |||||| || |||| | | |||||||||||| | ||||| | || Sbjct 2652 AATGTGGACCTTGCCGATGAACGGCACCATGTGATGCTCGCACAGCGAGTACAGATCAAT 2711 Query 31243 GTCGCGCACCGTCACCATCTGGTCATGCTTCTC 31275 |||||| || | ||||||| ||| || | ||| Sbjct 2712 GTCGCGGACGATGACCATCTCGTCGTGGTCCTC 2744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187257182043136