Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950915.1_202016-12-27] 14,576 sequences; 35,372,432 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq170 138 8e-28 >seq170 Length=18893 Score = 138 bits (152), Expect = 8e-28 Identities = 159/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| ||||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 6667 CACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTC 6608 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||||| ||||||||||| | ||| | || ||||| ||| Sbjct 6607 GAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTG 6548 Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 ||||||||||| || ||| | ||| |||| | | || || || | ||| |||||| Sbjct 6547 GATCTTCTGCTTGACATTGT--CAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTC 6490 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || ||||| |||||||| ||||| Sbjct 6489 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 6458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359926449505392