Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq191 228 1e-54 >seq191 Length=22522 Score = 228 bits (252), Expect = 1e-54 Identities = 439/637 (69%), Gaps = 8/637 (1%) Strand=Plus/Minus Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCAC 145694 |||| | ||| | || || | ||| ||| | | | ||||| | ||| || || ||||| Sbjct 15662 GATCTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCAC 15603 Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCC 145754 ||||| | ||||| |||||| || || | |||||||||||| || | | || ||| Sbjct 15602 ATGGTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAG-CACGCAGCC 15544 Query 145755 C-GTGAGGTGGGCGACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 | |||| || |||| | || | |||| ||| | |||||| || ||||| || ||||| Sbjct 15543 CTGTGACCTGCGCGATGA-GTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACG 15485 Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 || || |||||||| | ||||||||||||| ||| || || ||||| ||| || ||| Sbjct 15484 CCGAGTCCCATGTCAGCTGAGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACG 15425 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||||||| | | ||| || |||||||| ||||| | |||||||| |||||| Sbjct 15424 TAGAACTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTC 15365 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTC 145991 || || | | || || | | | || | |||||| |||||| || || | || Sbjct 15364 CATGCCGACATGATGATGCGAC-GATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTC 15306 Query 145992 CCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCC 146050 | |||||||| || ||||| || |||||| | | || | | | |||| ||| | Sbjct 15305 CGCCAGCTGGTCGACTCCCTGGCCAGTGTAATC-GGCGTGCATGGTCGTGTACTTGGCAC 15247 Query 146051 CGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCA 146110 | ||||| | ||||||||| || || || || || || || || | || | || || | Sbjct 15246 CAAAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGACCGA 15187 Query 146111 GCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCG 146170 | ||| | | ||| | ||| ||| || || | ||||| || | || |||| | Sbjct 15186 GACCGATGCTCTCCAGGTATTCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGT 15127 Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230 | | | |||| || ||| || ||||||||||| ||||||||||| ||| | Sbjct 15126 CCTGCAACGTCTTGGCGTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGC 15067 Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | |||||| || | ||||| |||||||| ||||| Sbjct 15066 CGCGCCAGAATACGCGTTTGGTCGTCAGCAGCGGGAA 15030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589995044859360