Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq45 352 3e-92 seq3662 98.7 1e-15 >seq45 Length=43062 Score = 352 bits (390), Expect = 3e-92 Identities = 608/866 (70%), Gaps = 24/866 (3%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | || | |||||||| ||| |||||| | ||||| || || | || Sbjct 41221 GAGCCGTTCCTCCTTGAGAACCCGAACCGTTTCGTGCTCTTCCCGATCCAGGAGAACGAG 41280 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCT- 116694 | |||| |||||||| ||||| |||||| |||||||| | || ||| | ||||| Sbjct 41281 GTCTGGCAGATGTACAAGAAGGCTGAGGCGAGCTTCTGGACGGCTGAAGAGATTGACCTC 41340 Query 116695 GTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 || || | | | || |||||| | | | | |||||||||||| | || |||||||| Sbjct 41341 GTGCACGACCTCAAG-GACTGGAACAACCTCACGGACAACGAGCGCTACTTTATCAAGCA 41399 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTC--GAGCGT 116812 |||||| || || ||||| ||||| || ||||||||||||||||| || | || | | Sbjct 41400 CGTGCTCGCGTTCTTCGCGGCCAGTGATGGCATCGTCAACGAGAACCTCGCGATGAAC-T 41458 Query 116813 TTCGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 || || || ||||||||||| | |||||||| |||||||||||||| ||||| || || Sbjct 41459 TTAGC--AGCGAGGTGCAGGTTCCTGAGGCGCGTTGCTTCTACGGCTTCCAGATTGCGAT 41516 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTC 116928 |||||| | |||||||| |||| ||| ||||||||||||||| | | | | Sbjct 41517 TGAGAACATCCACTCGGAGGTGTACTCGCTGCTCATCGACACGTACATCAAGGACCAGAC 41576 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 ||| |||| | || | | | | ||||||||||||||| || || || | ||||||| Sbjct 41577 CGAGAAGAACCACCTTCT-TCG--CGCCATCGAGACGATCCCTTGTGTGCAGAAGAAGGC 41633 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 | | |||||||| ||| || | | ||||| |||| |||||| | || || Sbjct 41634 CCACTGGGCGCTCAAGTGGTGCGACTCGCGCCGCGCCGCGTTCGCCGAGCGTATCGTCGC 41693 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||||| |||||||||||| ||||||| |||||| ||| | | || || |||||||| Sbjct 41694 GTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCTGCTCTATCTTCTGGCTCAA 41753 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| |||||||| ||||| ||||| | ||| |||||||||||||| | |||||||| Sbjct 41754 GAAGCGCGGCCTTATGCCTGGCCTCAGCTTCTCGAACGAGCTCATCTCGCGTGACGAGGG 41813 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTG---TTCAAGCATTTGGTGCAGCGACCGAGC-G 117224 ||| || |||||||| || || ||||| | ||||| | | || | | | | | Sbjct 41814 TCTCCACTGCGACTTCGCGTGCCTGCTGTACTCCAAGC--TCG--CCAACAAGCTCCCTG 41869 Query 117225 CGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284 | | ||| || |||||| | ||| || ||||| |||||| || ||| || | Sbjct 41870 AGTCTCGCATCCACGAGATCATTCGCGATGCCGTCGCGATCGAGAAGGAGTTCGTCCAGG 41929 Query 117285 AAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAG 117343 | |||| |||||| || | || | || | || | |||| || ||||| ||| Sbjct 41930 ACTCGCTCCCGGTGGAGCTCATCGGTATGAACT-CGTCTCTCATGTGCCAGTACATTGAG 41988 Query 117344 TTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAAC 117403 ||| |||||| | || || | || ||| | || |||||| |||||| | | ||| Sbjct 41989 TTCTGCGCCGATCGCCTCCTCCACGCGCTTGGCGTTGCCAAGATCTACAAGGTGTCGAAC 42048 Query 117404 CCGCTGGACTTTATGAACCTCATCTC 117429 ||| | |||| ||| || | ||||| Sbjct 42049 CCGTTTGACTGGATGGACATGATCTC 42074 >seq3662 Length=2004 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || ||||| |||| ||||| || || |||| ||| ||||| ||||| || |||| ||| Sbjct 108 GGAATCCCTCCGGATCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGC 167 Query 40852 ACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGG 40911 || || ||||||||||||||||||||| | |||||||| || ||| | ||| || | Sbjct 168 ACGCTTTCGGACTACAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTCCGCCTGCGT 227 Query 40912 GGCGGCGGC 40920 || || ||| Sbjct 228 GGTGGTGGC 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515147816379840