Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq191 125 5e-24 >seq191 Length=22522 Score = 125 bits (138), Expect = 5e-24 Identities = 399/610 (65%), Gaps = 8/610 (1%) Strand=Plus/Minus Query 96999 CTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTG 97058 ||| || || ||||||| || || || || ||||| | | || | || | || Sbjct 15659 CTTCAGCGTCGGGAAAGCCCGCGGGGTGCGGCCGAGCTGAACCTTAAGCGGTTCCACATG 15600 Query 97059 ATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGT 97118 |||| || ||||| ||||| || | ||||| || || ||||||| | | | || Sbjct 15599 GTTCAAGTAGATGTGCGCATCGCCGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGT 15540 Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178 ||| || ||||| | | ||| || || | ||||| || |||||||||||||| || || Sbjct 15539 GACCTGCGCGATGAGTCGAGTCAACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCGAG 15480 Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAA 97238 |||||| |||||||| | || || | |||||| || |||| || | || || || Sbjct 15479 TCCCATGTCAGCTGAGCGCTGGTACATCTGACACGACAGCTCGCCGTTGGCGACGTAGAA 15420 Query 97239 CTGACTCAATACATGACAGGGGGGCAACGCCAT-TTTTGGAACATCTAAGACATTCCAAG 97297 ||| | || | ||||| || |||| |||||| | | || | || ||||| | Sbjct 15419 CTGGCAGAACATGTGACACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAG-GGTTCCATG 15361 Query 97298 CACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTA 97357 | |||| | || | | |||| ||||||| || | | | | ||| | || | | Sbjct 15360 CCGACATGATGATGCGACGATCGTTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGCCA 15301 Query 97358 ATTGATCAACGCCTTCTCCACCATAATTGTGCTT--AAGACCTTGATATTCTGCTCCAAA 97415 || || || || | ||| |||| | || | | | | || || | || ||||| Sbjct 15300 GCTGGTCGACTCCCTGGCCAGTGTAATCG-GCGTGCATGGTCGTG-TACTTGGCACCAAA 15243 Query 97416 ATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACC 97475 || | ||| ||||| ||||| || ||||| || || || |||| | || || || ||| Sbjct 15242 GTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCACGATGACCGAGACC 15183 Query 97476 AAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCA-CACCAGATGCTG 97534 | | || | || | | |||||||| ||||||||||||| | || | ||| Sbjct 15182 GATGCTCTCCAGGTATTCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGTCCTG 15123 Query 97535 CAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTC 97594 ||| |||| || || || || ||||| ||||||| || |||||| | || || | Sbjct 15122 CAACGTCTTGGC-GTTTGTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACGCCGC 15064 Query 97595 TCCAAAATAC 97604 ||| ||||| Sbjct 15063 GCCAGAATAC 15054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346737154249880