Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq217 143 2e-29 >seq217 Length=20966 Score = 143 bits (158), Expect = 2e-29 Identities = 395/599 (66%), Gaps = 16/599 (3%) Strand=Plus/Plus Query 133133 GTTCTGCACGGACCCGTTTTCGGCCAAAATCTTGTTGCGCAATTCCGGAGTGTAAATGTC 133192 ||||||||| || |||| ||| || |||| ||| |||| || || || | ||| | Sbjct 16921 GTTCTGCACTGAGCCGTGGTCGTGCAGGATCTGGTTACGCACCTCGGGCGTCCAGATGCC 16980 Query 133193 GAGATCGATTAGCGCTTTGACGAGATACTGGTTGACCA-CTTGAAACTCGCCGGCGAGAA 133251 ||| ||||| ||| | || | || |||| ||| || | | |||| |||||| || || | Sbjct 16981 GAGCTCGATGAGCTCCTTCATCAGGTACTTGTTCACGATCGTGAA-CTCGCCTGCAAGCA 17039 Query 133252 CGCGTCTGAGATATACATTCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCT 133311 |||| | | || | || | ||||||||| |||| || |||||||||||||| |||| Sbjct 17040 CGCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCT 17099 Query 133312 GCGCCGTCGTCGCCGTGGGCATGTACGCCACCAACAAAGAGTTTCTTACGCCGTACTTGT 133371 |||| |||| |||||| ||||| ||| | || || ||||| | |||||||||| Sbjct 17100 GCGCGGTCGACGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCG 17159 Query 133372 TTATGTTGCACTGCAATTCGTTCCAGTCCCACAGATTGTTGGAATGATAGACGCCGTTCT 133431 | | || || | || ||||||||| || | ||| | || ||| Sbjct 17160 CGACGCTGGCCTTGAGCGCGGCCCAGTCCCAGAG---GCCGGA-----CGTCGGCGT--- 17208 Query 133432 CGTCGTCGTAGTTGTGAAAATGCAAAATACCCCTGCTCACCGGACTGTCCGTGTACGATT 133491 | || | | ||| | || || || ||| ||||||| || | || ||| Sbjct 17209 -GACGCCCCACATGTCGTACTGGAAGATGCCCTTGCTCACGGGTGAGCCCTCGTAGCTGG 17267 Query 133492 CATAGGGTCCGTTGATTTTGGCCAGCTCGCAGCTA-GCCTCCAAAGCGGCAAAGTAAATG 133550 | || || |||| || || ||||| || | | ||||||| ||| | ||||| | Sbjct 17268 CGTACGGGCCGTGCTCCTTCGCGAGCTC-CATCGAGGCCTCCATCGCGCCGAAGTACAGC 17326 Query 133551 GTTTCCGCGATTGAATAGTTGACGAACCTGGCATCGTCGCTATCGTAGGCGATGTCGAGA 133610 || || ||| | ||||| | || |||||||| || | ||| | | | Sbjct 17327 GTCTCGAAGATGTTCTTGTTGAGCTCGCGTGCCTCGTCGCTCTCAAACGCGTAGCCCATG 17386 Query 133611 AGAACAAACGCGTCGGCCAAACCCTGTATGCCGACGCCGATGGGTCGATGTTTTTTATTG 133670 || | |||||||| || | |||||| | ||||| |||||| || || || ||| Sbjct 17387 AGGATGAACGCGTCCGCGAGACCCTGCACGCCGATGCCGATCGGGCGGTGGCGCAGGTTG 17446 Query 133671 CTCCTCTCCGACTCGGCCGTGGGATAGTGGTTGACGTCGATGATCTTGTTGAGATTGCG 133729 || | ||| | ||||| | || |||| ||||| |||||||| ||||||||| ||||| Sbjct 17447 CTTCGCTCGGCCTCGGGGATCGGGTAGTAGTTGATGTCGATGACCTTGTTGAGGTTGCG 17505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433771795478128