Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq45 174 2e-38 >seq45 Length=43062 Score = 174 bits (192), Expect = 2e-38 Identities = 392/585 (67%), Gaps = 7/585 (1%) Strand=Plus/Minus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 ||| || || ||||| |||||||| ||||||||||| | || | ||||| || | Sbjct 41842 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 41783 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || | Sbjct 41782 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 41723 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG- 33752 | |||||||| || || || ||||| || || | | | ||| | | |||||| | Sbjct 41722 AGAAGAAGATGCCCTCGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGGC 41663 Query 33753 TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33810 | || |||||| | ||||| | ||||||||| | |||||||| ||||| || | Sbjct 41662 GCGAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCGA 41603 Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33870 |||| || || | ||| || || | || || | || || ||||| | || Sbjct 41602 TGGCGCGAAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGCG 41543 Query 33871 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33930 |||| ||||| || ||||| ||||| || ||||| || |||||||| || | |||| Sbjct 41542 AGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGCGCCT 41483 Query 33931 CGGTAATCTGCACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATTCCATC 33988 | | || |||||| || | | ||| |||| || | || || || || || ||||| Sbjct 41482 CAGGAACCTGCACCTCGCTGCTAAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCATC 41425 Query 33989 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTT 34048 |||||| || || ||||| | || || || ||||| || |||| || || || Sbjct 41424 ACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCGTTGTCCGTGAGGTT 41365 Query 34049 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 34108 ||||| || |||| || | | || | ||||| | ||||| || ||||| Sbjct 41364 GTTCCAGTCCTTGAGGTCGTGCACGAGGTCAATCTCTTCAGCCGTCCAGAAGCTCGCCTC 41305 Query 34109 TGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 34153 ||||| || ||||| | ||||| || | | ||||| ||||| Sbjct 41304 AGCCTTCTTGTACATCTGCCAGACCTCGTTCTCCTGGATCGGGAA 41260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629730338771520