Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq45 178 2e-39 >seq45 Length=43062 Score = 178 bits (196), Expect = 2e-39 Identities = 395/586 (67%), Gaps = 9/586 (2%) Strand=Plus/Minus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || || ||||| |||||||| ||||||||||| | || || ||||| || | Sbjct 41842 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 41783 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || || Sbjct 41782 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGA-GCAGAACGAGCCC 41724 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 || |||||||| || || || || || || || || | | ||| | | ||||| | Sbjct 41723 GAGAAGAAGATGCCCTCGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGG 41664 Query 50131 -TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 | || |||||| | ||||| | ||||||||| | |||||||| ||||| || Sbjct 41663 CGCGAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCG 41604 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 ||||| || || | ||| || || | || || | || || ||||| | || Sbjct 41603 ATGGCGCGAAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGC 41544 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 |||| ||||| || ||||| ||||| || ||||| || |||||||| || | ||| Sbjct 41543 GAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGCGCC 41484 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCCGT 50365 || | || |||||| || | | ||| ||||| || | || || || || || || | Sbjct 41483 TCAGGAACCTGCACCTCGCTGCTAAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCAT 41426 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT 50425 ||||||| || || ||||| | || || || ||||| | |||||| || || | Sbjct 41425 CACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCGTTGTCCGTGAGGT 41366 Query 50426 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | ||||| || |||| || | | || | ||||| | ||||| || |||| Sbjct 41365 TGTTCCAGTCCTTGAGGTCGTGCACGAGGTCAATCTCTTCAGCCGTCCAGAAGCTCGCCT 41306 Query 50486 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAA 50531 | ||||| || ||||| | ||||| || | | ||||| ||||| Sbjct 41305 CAGCCTTCTTGTACATCTGCCAGACCTCGTTCTCCTGGATCGGGAA 41260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718169283857760