Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq191 147 1e-30 >seq191 Length=22522 Score = 147 bits (162), Expect = 1e-30 Identities = 456/699 (65%), Gaps = 24/699 (3%) Strand=Plus/Minus Query 25286 CATCCTCATCCTTATGGCGGGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTT 25345 |||| |||| | || | | |||||| | |||||| ||||| ||| ||||| Sbjct 15755 CATCGCCATCTTGATCGTGCCATGAGGCTTGTAACCTTCCAGCTCGAAGTCCTCGAAGAC 15696 Query 25346 AAAGTCGTCCAGGCTCTCCACCCTC-CTG--TTTATCCTCAGTGT-GGGAAAGGGTCTGG 25401 ||| || || | ||| | | || ||| || ||| |||| || ||||||| || Sbjct 15695 AAACTCATCGATGCTGTTGGTCTTCTCTGGGTTGATCTTCAGCGTCGGGAAAGCCCGCGG 15636 Query 25402 GCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTC 25461 | | | | |||||||| ||| |||||||| || || | || ||||| ||| || || | Sbjct 15635 GGTGCGGC-CGAGCTGAACCTTAAGCGGTTCCACATGGTTCAAGTAGATGTGCGCATCGC 15577 Query 25462 CCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGA 25521 | | ||||||| || ||||| | ||||| || || | || || | || | Sbjct 15576 CGATCGTGTGGATGAAGTCTCCAGCACGCAGCCCTGTGACCTGCGCGATGAGTCGAGTCA 15517 Query 25522 GGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGG 25581 || |||||| ||||||||||| || || |||| ||||||| | | || | |||| Sbjct 15516 ACAGCGCGTAGCTCGCGATGTTAAAAGGCACGCCGAGTCCCATGT-CAGCTGAGCGCTGG 15458 Query 25582 TAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGGTGTAGCACGGA 25641 || | ||||||||| ||||| ||| | ||||| ||||| || | ||| ||||| Sbjct 15457 TACATCTGACACGACAGCTCGCCGTTGGCGACGTAGAACTGGCAGAACATGTGACACGGC 15398 Query 25642 GGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCT 25701 || || || || | ||| ||||||||| || ||| |||||||| | || Sbjct 15397 GGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGACGATCG 15338 Query 25702 TCTGGGTT-GTC-----CCTG---ATAAGATCCGCGGTGTTTTGCAGCTGATCCACCCCC 25752 | |||||| ||| | || || | ||||| |||||| || || ||| Sbjct 15337 TTTGGGTTCGTCTTGAGCTTGTGAATGACCTCCGC---------CAGCTGGTCGACTCCC 15287 Query 25753 ATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAAC 25812 || | ||| || || |||| |||||||| || || || | | ||||||||| Sbjct 15286 TGGCCAGTGTAATCGGCGTGCATGGTCGTGTACTTGGCACCAAAGTGGCGCCACTGGAAG 15227 Query 25813 CCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAG 25872 || ||||| ||||| || || ||| |||| | || | | || | | |||| | Sbjct 15226 CCATACACTGGTCCGAGATCGCCAGCTTCACGATGACCGAGACCGATGCTCTCCAGGTAT 15167 Query 25873 TCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTT 25932 || |||| ||||| | ||||| || | | ||||| || | | |||| |||| Sbjct 15166 TCCTTGGATCCATTACCATCCCAAATGTGGATGCCCTTGTCCTGCAACGTCTTGGCGTTT 15107 Query 25933 GTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGACG 25971 ||| || |||| ||||||||||||||| ||| |||| Sbjct 15106 GTGTCGCCACTGATGAACCACAGCAGCTCTTCCGCGACG 15068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340091652087132