Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq217 425 1e-113 seq191 132 1e-25 >seq217 Length=20966 Score = 425 bits (470), Expect = 1e-113 Identities = 1023/1528 (67%), Gaps = 34/1528 (2%) Strand=Plus/Minus Query 363379 GAGTATGA-TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGG 363437 ||||| || || ||| || | |||||| | ||||| || ||||| || || ||| Sbjct 18504 GAGTACGACTACTTT-GGCTTCAAGACGCTCGAGAAGTCGTACCTCCTGCGCGTCGGTGG 18446 Query 363438 TGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCC 363497 | | | ||| ||||||||||| ||| | |||| || ||| | || ||||| | Sbjct 18445 CAAGGTCGCTGAGCGCCCGCAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCACAAGCA 18386 Query 363498 GGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTC-GTGTATTCACGCAC 363555 || | || |||||| | || || || || | | || || | | ||||||||| Sbjct 18385 TGACATCGACGCCGCGCTCGAGACGTACGAG--TACATGTCGCAAAGCTTCTTCACGCAC 18328 Query 363556 GCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT 363615 || ||||| || ||| ||| || || || | || ||| |||| || ||||| || Sbjct 18327 GCGACGCCGACGCTGTTCAACGCCGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTG 18268 Query 363616 CTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTT 363675 || ||||||||||| || |||||||| |||| |||||| || ||| | || || Sbjct 18267 CTCGCCATGAAGGACGACTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCCTGC 18208 Query 363676 ATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAG 363734 || |||||| || ||||| |||||||| | || | ||||| | || || ||| Sbjct 18207 ATCTCCAAGTGGGCCGGCGGCATTGGTGTCAGCG-TGCACAACATCCGCGCGACCAACTC 18149 Query 363735 TTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 ||||| || ||||| || | ||||| || || || |||||||| || ||||| | Sbjct 18148 GTACATCCGTGGCACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGTTCAA 18089 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | | || ||| | || || || |||||||| || |||||||| || |||| || ||||| Sbjct 18088 CGACACGGCGCGTTATGTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTA 18029 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 ||||||||| || ||||| || || ||||| || || ||| ||| ||| || || Sbjct 18028 TCTCGAGCCGTGGCACGCCGACATCTTCGAGTTCCTCGACCTCAAGAAGAACCACGGCAA 17969 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 ||| || || |||||||||||||| || | ||| || | || | || ||||| Sbjct 17968 CGAGCTGCACCGCGCTCGTGATCTGTTCTACGCGATGTGGATTCCCGATCTCTTCATGAA 17909 Query 363975 GCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCT 364031 |||||| ||||| || || ||| || || ||||| |||| || ||||| Sbjct 17908 GCGCGTTGAGGCCAACGGCGAG---TGGAGCCTGTTCTGCCCGAACGAGGCACCGGGTCT 17852 Query 364032 TTCC--GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGA 364089 | | || || |||||||||| | | || || ||| | |||| || ||||| Sbjct 17851 CTACACGACGT--GGGGTGACGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGC 17794 Query 364090 AAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATT 364149 || || ||||| || | ||| ||| |||| ||||| || ||| | || |||||||| Sbjct 17793 CGCGCGCGCAAGACGATCCGCGCGCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATC 17734 Query 364150 GAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAG 364209 ||||| || || || || ||| ||||||| || ||||| ||||||||||| ||||||||| Sbjct 17733 GAGACGGGCACGCCGTACATGCTGTACAAGGACTCGTGTAACCGCAAGTCGAACCAGCAG 17674 Query 364210 CACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCC 364269 |||| || || || | ||||||||| || |||| | | || ||||| | ||| Sbjct 17673 AACCTCGGCACGATCCGCTCGAGCAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCC 17614 Query 364270 GACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG-- 364327 |||||| || || || ||||| ||||| |||||||| | |||||| || || | Sbjct 17613 GACGAGGTCGCGGTGTGCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTGAACGACGAC 17554 Query 364328 -GTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGAC 364386 || || ||| | || | || || ||| | ||| | | || |||| ||| || Sbjct 17553 AAGACCTTCGACTTCAAGAAGCTGTACGACATCACCAAGGTCGTCACGCGCAACCTCAAC 17494 Query 364387 AAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCAT 364446 ||||| ||||||| || || || || || || || |||||||| || |||| || Sbjct 17493 AAGGTCATCGACATCAACTACTACCCGATCCCCGAGGCCGAGCGAAGCAACCTGCGCCAC 17434 Query 364447 CGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG---ATG 364503 |||||||| || | || || ||||| ||||| |||| | | || |||| | Sbjct 17433 CGCCCGATCGGCATCGGCGTGCAGGGTCTCGCGGACGCGT---TCATCCTCATGGGCTAC 17377 Query 364504 GCATTTGA-TTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTT 364562 || ||||| || | || || || | || || ||| | ||||| || || |||| || Sbjct 17376 GCGTTTGAGAGCGAC-GAGGCACGCGAGCTCAACAAGAACATCTTCGAGACGCTGTACTT 17318 Query 364563 TGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGA 364622 | ||| ||| || ||| || | || || | || |||| | | || || Sbjct 17317 CGGCGCGATGGAGGCCTCGATGGAGCTCGCGAAGGAGCACGGCCCGTACGCCAGCTACGA 17258 Query 364623 GGGGTCCCCTCTTTCGC-AGGGAAAATTCCAGTTTGATCTATGGAATGTCACGC---CAT 364678 ||| || || | | || |||| | ||||||| || | ||| ||||||| | | Sbjct 17257 GGGCTCACC-CGTGAGCAAGGGCATCTTCCAGTACGACATGTGGGGCGTCACGCCGACGT 17199 Query 364679 CTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACT 364738 | | || ||| |||||| |||| ||| ||| | || | || ||||||| Sbjct 17198 CCGGCCTCTGGGACTGGGCCGCGCTCAAGGCCAGCGTCGCGCAGTACGGCGTGCGCAACT 17139 Query 364739 CCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGT 364798 | || | ||||| ||||| ||||| || || || ||||||||||| |||||||||| Sbjct 17138 CGCTGCTGCTCGCGCCGATGCCGACGGCGTCGACCGCGCAGATCCTCGGCAACAACGAGT 17079 Query 364799 GCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGG 364858 |||| ||||| || | ||| | || ||||| || ||| | || || || || Sbjct 17078 CGATCGAGCCGTTCACGACCAACATGTACAACCGCCGCGTGCTTGCAGGCGAGTTCACGA 17019 Query 364859 TAGTTAATAAGTACCTAGTCAAGGATCT 364886 | || || |||||||| | ||||| || Sbjct 17018 TCGTGAACAAGTACCTGATGAAGGAGCT 16991 >seq191 Length=22522 Score = 132 bits (146), Expect = 1e-25 Identities = 341/515 (66%), Gaps = 6/515 (1%) Strand=Plus/Plus Query 111360 GAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAAT 111419 ||||| || |||||||| || | || ||||| || || || |||||| | || Sbjct 15075 GAAGAGCTGCTGTGGTTCATCAGTGGCGACACAAACGCCAA-GACGTTGCAGGACAAGGG 15133 Query 111420 G-TAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGA 111478 | | ||||||||||| |||||||| || | || || | ||||| | | Sbjct 15134 CATCCACATTTGGGATGGTAATGGATCCAAGGAATACCTGGAGAGCATCGGTCTCG--GT 15191 Query 111479 CAACG--AAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCA 111536 || || ||| || |||||||||||||| || || || || ||||||||||||||||| Sbjct 15192 CATCGTGAAGCTGGCGATCTCGGACCAGTGTATGGCTTCCAGTGGCGCCACTTTGGTGCC 15251 Query 111537 GACTACAAAACCATGCACGACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 | |||| |||||||||| | || | |||||| || || | | | ||| Sbjct 15252 AAGTACACGACCATGCACGCCGATTACACTGGCCAGGGAGTCGACCAGCTGGCGGAGGTC 15311 Query 111597 ATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCA 111656 ||| | | | |||| ||||||| ||||||||| || ||| ||||||||||| Sbjct 15312 ATTCACAAGCTCAAGACGAACCCAAACGATCGTCGCATCATCATGTCGGCATGGAACCCT 15371 Query 111657 AATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACAC 111716 | | | | ||||| || || || ||||| | | |||||||| || || | Sbjct 15372 GCGGACCTCAAGGAGATGGCGCTGCCGCCGTGTCACATGTTCTGCCAGTTCTACGTCGCC 15431 Query 111717 GACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCG 111776 |||| ||| || || || ||||| ||||| || ||||| || || || || || || Sbjct 15432 AACGGCGAGCTGTCGTGTCAGATGTACCAGCGCTCAGCTGACATGGGACTCGGCGTGCCT 15491 Query 111777 TTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAA 111836 ||||| || || || ||||| || | ||| | | ||||| || | ||| || Sbjct 15492 TTTAACATCGCGAGCTACGCGCTGTTGACTCGACTCATCGCGCAGGTCACAGGGCTGCGT 15551 Query 111837 CCGGGTGAATTCATTCACGTTATCGGAGATGCGCA 111871 | || || ||||| ||| ||||| |||||||| Sbjct 15552 GCTGGAGACTTCATCCACACGATCGGCGATGCGCA 15586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303168505867688