Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq45 141 1e-28 >seq45 Length=43062 Score = 141 bits (156), Expect = 1e-28 Identities = 374/564 (66%), Gaps = 9/564 (2%) Strand=Plus/Minus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || || ||||| |||||||| ||||||||||| | || | ||||| || | Sbjct 41842 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 41783 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 | |||| || ||||| ||||| ||||| || ||||| || || || ||| || || || Sbjct 41782 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGA-GCAGAACGAGCCC 41724 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 || ||||| || || || || || || || || | | | ||| | | |||||| | Sbjct 41723 GAGAAGAAGATGCCCTCGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGG 41664 Query 32832 -TCATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 | || |||||| | ||||| | ||||||||| | |||||||| || ||||| Sbjct 41663 CGCGAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCG 41604 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || || || | ||| || || | || || | || || || || | || Sbjct 41603 ATGGCGCGAAGAAGGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGCAGC 41544 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 |||| ||||| || ||||| ||||| || || || || ||||||||||| | ||| Sbjct 41543 GAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGCGCC 41484 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATTCCGT 33066 || | || ||| || || | | ||| |||| || | || || || || || || | Sbjct 41483 TCAGGAACCTGCACCTCGCTGCTAAA--GTTCATCGCGAGGTTCTCGTTGACGATGCCAT 41426 Query 33067 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 33126 ||||||| || || ||||| | || || || ||||| || |||| || || | Sbjct 41425 CACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCGTTGTCCGTGAGGT 41366 Query 33127 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 | ||||| || |||| || | | || | ||||| | ||||| || |||| Sbjct 41365 TGTTCCAGTCCTTGAGGTCGTGCACGAGGTCAATCTCTTCAGCCGTCCAGAAGCTCGCCT 41306 Query 33187 CTGCCTTTTTATACATATTCCAGA 33210 | ||||| || ||||| | ||||| Sbjct 41305 CAGCCTTCTTGTACATCTGCCAGA 41282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633544210286400