Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq238 199 9e-46 >seq238 Length=20387 Score = 199 bits (220), Expect = 9e-46 Identities = 690/1057 (65%), Gaps = 51/1057 (5%) Strand=Plus/Plus Query 333314 CTCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAG 333373 ||| ||||| ||||| || ||||||| ||||| |||||||||| || ||||| || Sbjct 7011 CTCCTTGTCCTCACCCGACTGGAAACGCCACTGGATGTACTGGTTGGCCGTAATGTCGAG 7070 Query 333374 ATGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATG 333433 || ||||| |||||||||||||| ||||| || ||||| || | |||||| || || Sbjct 7071 GTGCTCCTCAATGTGGTGGAAAGCGTGCTGGGCAACGTAGGCGAAACGCATGGCCGGGTG 7130 Query 333434 CTTCCAAACACTTCCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCT 333493 |||||| || | ||| || | || | | ||||| |||| ||| ||||| || Sbjct 7131 CTTCCACACCGTACCGACCGTAGGCTCGACCTCACCCGTCAGCATCTTGATGAGCGTCGA 7190 Query 333494 TTTTCCCGCACCATTTTCGCCTACCACACCAATCCTGGAGTTCAGCGATACCTGGGCATT 333553 || || ||||| || ||| | || |||| | ||| |||||| || | | Sbjct 7191 CTTACCGGCACCGTTCGGGCCGATAACGGCAATACGCGAGGCCAGCGA-ACACG-----T 7244 Query 333554 CACGTTG---TCAAAGATTA---GTTTTTCCGTACCCGGATACTTGAACCCCACACCGCG 333607 ||||||| ||| ||| | || || || || |||| | || || || Sbjct 7245 CACGTTGATGTCACGGATCGACGGCTTGTCGCGGCCAGGGTACTGGTACGAG-CAGTTCG 7303 Query 333608 T-AGCTTCATGAT-GGC--ACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGG 333663 | || ||||| ||| || | ||| ||||| | | ||||| || ||||| | Sbjct 7304 TGAGACGAATGATCGGCTTACCCTTGTTCT---TGATATCAGCAAGGAAACCCGGCTCAG 7360 Query 333664 GGAACTTCCACGTG--GTCTTCGTC-TCGGTAAGGGCGTAGTAACTCGCTGATTCGGGAC 333720 ||||| | || || | | || | || ||| ||||||| || | || || Sbjct 7361 GGAACGTGAACTTGAAGGCAGCGGCCTC---AAGCTCGTAGTACGTCTTGGCCTCCGGCT 7417 Query 333721 GCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGT 333780 || ||| ||||||||||| || || ||||||||| |||| ||||| |||| |||| Sbjct 7418 TCTGCTTGACGAACTCGGAGAGGTTACCCTTGTACGTCTTGAGCTTACGGTT---CTCGT 7474 Query 333781 AATGGATAATAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGC 333840 | ||||| || ||||| || | ||||||||| || |||||||| ||||| || | Sbjct 7475 AGTGGATGATGTTCGTGCAGACCGTGTCGAGGAAACCAGAGTCGTGCGACACGATGAGCG 7534 Query 333841 ACGAAACGTCCTTAAGGTTGATCAGGTATTCAATCAGCCACCTCACGTTAGACACAGAAA 333900 ||| |||| | | ||| | | ||||| || |||||| | ||||| |||| | Sbjct 7535 ACGTCACGTTCGTGAGGCTCGTGAGGTAGTCCTCGAGCCACTTGACGTTGTGCACATCCA 7594 Query 333901 GATGGTTGGTCGGCTCGTCAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAA 333960 ||||| |||||||| |||||||| || | | || |||| |||||| ||||| || | Sbjct 7595 AGTGGTTCGTCGGCTCATCAAGAAGGAGGATATCAGCCTTCATGAGCATGGCACGGGCCA 7654 Query 333961 GAGCGAGTTTCATTTTCCACCCTCCTGAAAGAGTGTTAATTGGGGCAGATTGGCGCTCAA 334020 |||| ||||| ||||| || || | |||| | |||| |||| || | Sbjct 7655 ACTCGAGCTTCATCTTCCAACCACC--AGAGAGGGCACCGACAGGCA---TGGC-CTGCA 7708 Query 334021 TATC------AAAGCCAACCGATTCTAGAGTA-GTTAC-GATCTTTTCACGAGACCAAAT 334072 | || ||||| || || ||| | || || || || ||||| | | | Sbjct 7709 TCTCGGCCGTGAAGCCGAC--GCTCGTGAGCATGTCACGGACCTCCTCACGCGGC---AG 7763 Query 334073 GTTTTCCTTTACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGA 334132 ||| ||| | || ||| | ||||||||||||| | | | || || Sbjct 7764 GTT---CTTGAGGGCCTCGTCACAGAACATGAAGTCAATGACCGGAAGCTCAGCCTCCTC 7820 Query 334133 CCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTC 334192 | | ||| | ||| || ||| | | || || | ||||| | ||||| || || Sbjct 7821 AGCCTGGAGGTTGTGCTCGACGAAGACCGTCTTGAGCTCATCCTGGGTCGGGAAACCCTC 7880 Query 334193 AAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACA 334252 ||||| |||||| || |||||||| || || || ||||| ||||| || || || Sbjct 7881 GAGCTGGCCGTTCGAGATGGCGCGCATAAGCGTCGACTTACCGCAACCGTTCGGGCCGCA 7940 Query 334253 CAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCC 334312 ||||||||||||| |||||||| || || || | |||||||| ||||| | || Sbjct 7941 GAGACCGTAGCGGTGGCCACGCTTGAGGCGGAGACGGGCGTTGTTCAGCAGAATCATACC 8000 Query 334313 ACCATATGCCAGAGAAAATTCACAATCACACAGATCC 334349 ||| || || || || || || || | || |||||| Sbjct 8001 ACCGTACGCGAGCGAGAACTCGCAGTTGCAGAGATCC 8037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102723375875400