Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq217 244 1e-59 seq45 210 3e-49 seq440 84.2 3e-11 >seq217 Length=20966 Score = 244 bits (270), Expect = 1e-59 Identities = 764/1161 (66%), Gaps = 44/1161 (4%) Strand=Plus/Plus Query 114245 GCCTCGTCGGAATCAAACGCG-AGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGA 114302 ||||||||| ||||||||| || | || | || || | ||||||||||| || | Sbjct 17357 GCCTCGTCGCTCTCAAACGCGTAGCC--CATGAGGATGAACGCGTCCGCGAGACCCTGCA 17414 Query 114303 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGAT 114359 | |||| ||| || ||||| || | || || |||| ||| ||| | || | Sbjct 17415 CGCCGATGCCGATCGGGCGGTGGCGCAGGTTGC---TTCGCTCGGCCTCGGGGATCGGGT 17471 Query 114360 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 114419 | | || | ||||| ||| | || || || ||||| ||||| ||||| || | | Sbjct 17472 AGTAGTTGATGTCGATGACCTTGTTGAGGTTGCGCGTGACGACCTTGGTGATGTCGTACA 17531 Query 114420 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACG 114479 |||| | | | || || | | || || || ||| |||| | || ||||| |||| Sbjct 17532 GCTTCTTGAAGTCGAAGGTCT---TGTCGTCGTTCACAAACTTGGACAGCGCGATGGACG 17588 Query 114480 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAAT 114539 | || || ||||| | | ||| || |||||||| | | || || | | Sbjct 17589 CGAGGTTGCACACCGCGACCTCGTCGGGCGACGTGTACTCGAGCACCTCGCAGCAGAGGT 17648 Query 114540 TTGAACTCTTA---ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCT 114596 | ||| || ||||| | ||||| || || ||||| |||||||| |||| Sbjct 17649 TG---CTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTACACGAGTCCT 17705 Query 114597 TGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACAT 114656 |||| |||||||| ||||| |||||||| | || |||| ||| || || ||||| Sbjct 17706 TGTACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAGA--- 17762 Query 114657 CGGCGGCTG-GCACAG-TGGCGTTG---GCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 114711 || |||| || | | | | ||| || || ||||| |||||||| ||| || Sbjct 17763 --GCTGCTGCGCGCGGATCGTCTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAG 17820 Query 114712 GGCTTCAAACTCTTCACCC-ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGA 114770 || || ||||| |||||| ||| | | | |||| || ||||||| | |||||||| | Sbjct 17821 CGCCTCGAACTCGTCACCCCACGTCGTGT-AGAGACCCGGTGCCTCGTTCGGGCAGAACA 17879 Query 114771 GAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTG 114830 | ||| | || ||||||| |||||||||||||| || || ||||| | || Sbjct 17880 GGCTCCACTCGCCGTTGGCCTCAACGCGCTTCATGAAGAGATCGGGAATCCACATCGCGT 17939 Query 114831 AGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 114889 |||| ||||| ||| ||| || || | | || || || | || | || Sbjct 17940 AGAACAGATCACGAGCGCGGTGCAGCT-CGTTGCCGTGGTTCTTCTTGAGGTCGAGGAAC 17998 Query 114890 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA---CGA 114946 || | ||| || ||||||||||| || || |||| ||||| || ||||| || | Sbjct 17999 TCGAAGATGTCGGCGTGCCACGGCTCGAGATACATCGCGAACGAGCCCTTGCGCTTGCCG 18058 Query 114947 CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCA 115006 ||| |||| | ||||| | ||| ||| | || || ||||| ||||| || | || || Sbjct 18059 CCACCCTGATCCACATAACGCGCCGTGTCGTTGAACACGCGCAGCATGGGCACGAGGCCG 18118 Query 115007 TCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCATGGATGT 115064 | || ||| || || || || || ||||| || | || | || | || | | Sbjct 18119 TTCGACGAGCCGTTCGTGCCACGGATGTACGAG--TTGGTCGCGCGGATGTTGTGCACGC 18176 Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124 | |||||| || || |||||||| ||||| ||||||| | |||| || | |||| Sbjct 18177 TGACACCAATGCCGCCGGCCCACTTGGAGATGCAGGCGCACTGCTTGAGCGTGTCATAGA 18236 Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTG 115184 | || ||||||||||| |||| | |||| |||||||| ||||| || || | | Sbjct 18237 TGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCG 18296 Query 115185 GTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTAT 115244 | || || |||||||| || || || |||||||| |||| | | ||| ||||| | | Sbjct 18297 GCGTGCCGGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACT 18356 Query 115245 CGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAA 115304 |||| ||||| | ||||| ||||| | | ||| || |||| | ||| |||| || Sbjct 18357 CGTACGTCTCGAGCGCGGCGTCGATGTCATGCTTGTGGATGCCGACAGCGACGCGCAGAA 18416 Query 115305 ACATGTATTG-GGGTGTTTCCATC-AGGATACCATCGAGCCTCTGGAGGTAACTCTTCTC 115362 ||| | || ||| | | || | | | ||| ||| | | ||||||| |||||| Sbjct 18417 TCATCTGCTGCGGGCGCT--CAGCGACCTTGCCACCGACGCGCAGGAGGTACGACTTCTC 18474 Query 115363 CAAGGTCTTGAGACCAAAATA 115383 | ||||||| ||||| || Sbjct 18475 GAGCGTCTTGAAGCCAAAGTA 18495 >seq45 Length=43062 Score = 210 bits (232), Expect = 3e-49 Identities = 402/581 (69%), Gaps = 16/581 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || || ||||||||||||||||| ||||| || | | ||| | ||||| Sbjct 42120 GTACTCGCCCACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCAT 42061 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAGAC 125876 | ||||| |||||| || | || |||||| | |||| | | |||||| | Sbjct 42060 CCAGTCAAACGGGTTCGACACCTTGTAGATC-TTGGCAACGCCAAGCGCGTGGAGGAGGC 42002 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 |||| | | | |||||||||||| |||| ||||||||||||||||| | Sbjct 42001 GATCGGCGCAGAACTCAATGTACTGGCACATGAGAGACGAGTTCATACCGATGAGCTCCA 41942 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 ||||||| |||| || |||| ||||||| || | ||||| || || | ||| ||| Sbjct 41941 CCGGGAGCGAGTCCTGGACGAACTCCTTCTCGATCGCGACGGCATCGCGAATGATCTCGT 41882 Query 125997 GAATG-GTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC-GGCA----A 126050 | ||| | | | || | | ||| || |||| |||| | | |||| | Sbjct 41881 GGATGCGAGACTCAGGGAGCTTGTTGGCG---AG-CTTG--GAGTACAGCAGGCACGCGA 41828 Query 126051 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCA 126110 | || |||||||||||||||||| |||||||| || |||||||||| || || |||| Sbjct 41827 AGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGAAGCTGAGGCCAGGCA 41768 Query 126111 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCT 126170 | || || |||||||| | |||||| || | || || || |||||||||||||| |||| Sbjct 41767 TAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCGAGAAGAAGATGCCCT 41708 Query 126171 CCACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAAACCAC 126229 | || |||||||| | || |||||| || || | ||||| | | ||| ||||| Sbjct 41707 CGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCGCGGC-GCGAGTCGCACCAC 41649 Query 126230 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGT 126289 || | |||||| || ||||| |||| | ||| |||| |||| ||| || || || Sbjct 41648 TTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCGATGGCGCGAAGAAGG 41589 Query 126290 TCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330 | ||||| || | | || ||||||||| | || ||||| Sbjct 41588 TGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAG 41548 >seq440 Length=14964 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 172811 GGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTC 172870 ||||| || ||||||| ||| || ||||| ||||| || ||| | ||||| ||| || Sbjct 1724 GGGAAGACGCCGTAGTAATCGCGTCCAACAACAGAGAGGCCACTGATTGCGAAGGTTTTG 1665 Query 172871 GCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTG 172930 || || || ||||| |||| || ||||| || ||| || | || || || || | | Sbjct 1664 GCTGACTCGCCCTCAGTCAGAATCAGCGTGCAGTTTTGAGCCTTCGCTGTGCCGGCGTAG 1605 Query 172931 TTCGCATCGTCCAACTTGGGAATACCAGT 172959 ||||||||||| | ||| || || || || Sbjct 1604 TTCGCATCGTCGAGCTTTGGGATTCCTGT 1576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597270836658720