Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq3370 93.3 3e-14 >seq3370 Length=2290 Score = 93.3 bits (102), Expect = 3e-14 Identities = 177/258 (69%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 108343 GGGTTCGGTGTGACGGCCGGCGTCCATCGGATGTGGACCCACAAAGCCTACAAGGC-CAC 108401 ||| |||| | |||||||||| || || ||||| | ||| ||||||||| ||| Sbjct 1474 GGGCTCGGCATCACGGCCGGCGCGCACCGCCTGTGGGCGCACCGCAGCTACAAGGCGCAC 1415 Query 108402 CGCCCCGTTCAGGGTGTTCCTGGCGCTTTGCTTCTCGGTGGCAGGACAGAACACCATCCC 108461 ||| ||| | | | ||||| ||| ||| |||| |||| ||| ||| ||| Sbjct 1414 GGCCTCGTGC-GCTTCTTCCTCATGCTCTGCAACTCGATGGCGAACCAGGGCACGATCTT 1356 Query 108462 GCAGTGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACA 108521 || ||| | ||| ||| | || |||||||||||||| |||||| |||| ||||| || Sbjct 1355 CCACTGGTGCCGCGACCACCGCGTGCACCACAAGTACTCGGACACGTCGGCGGACCCGCA 1296 Query 108522 CAACGCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCC 108581 | || | | | || |||| || ||||| |||| ||| | | ||| |||||||| Sbjct 1295 CGACTCGGGCCGCGGCTTCTTCTTTGCGCACATGGGGTGGTTGCTCGTGAAGAAGGACCC 1236 Query 108582 CGACGTGATCTCGGCCGG 108599 |||||| |||||| Sbjct 1235 ACGTGTGATCGAGGCCGG 1218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381721227744096