Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq217 118 1e-21 >seq217 Length=20966 Score = 118 bits (130), Expect = 1e-21 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 145974 GTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCAATTCTGGAGTGTAAATGTT 146033 ||||||||| || || | ||| || || | ||| |||| || || || | ||| Sbjct 16921 GTTCTGCACTGAGCCGTGGTCGTGCAGGATCTGGTTACGCACCTCGGGCGTCCAGATGCC 16980 Query 146034 CAAGTCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAAC 146093 | || | ||| |||| || || |||| ||| || | | |||||||| || || || Sbjct 16981 GAGCTCGATGAGCTCCTTCATCAGGTACTTGTTCACGATCGTGAACTCGCCTGCAAGCAC 17040 Query 146094 GCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTG 146153 ||| | |||| |||| | ||||||||||||| |||||||||||| ||||| ||||| Sbjct 17041 GCGGCGGTTGTACATGTTGGTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTG 17100 Query 146154 CGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGT 146206 ||| |||| || || ||||| ||| | ||||| ||||| | |||||||| Sbjct 17101 CGCGGTCGACGCCGTCGGCATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGT 17153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475434919364160