Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq45 242 4e-59 >seq45 Length=43062 Score = 242 bits (268), Expect = 4e-59 Identities = 398/560 (71%), Gaps = 14/560 (3%) Strand=Plus/Minus Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946 ||| || ||| || |||||||| || | |||||||| | || ||||| ||||| || Sbjct 41842 ACAGCAGGCACGCGAAGTCGCAGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTCGAGA 41783 Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006 | | | ||| ||||| |||||||| || |||||||| || || | | ||| ||||| Sbjct 41782 AGCTGAGGCCAGGCATAAGGCCGCGCTTCTTGAGCCAGAAGATAGAGCAGAACGAGCCCG 41723 Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066 | ||||||| |||||||||||| ||||| || || | |||||| |||||| ||| | Sbjct 41722 AGAAGAAGATGCCCTCGACGGCAGCGAACGCGACGATACGCTCGGCGAACGCGGCG-CGG 41664 Query 133067 TGCTGG-CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125 || | || ||| |||||||| | |||||| | | || || || ||||| ||| Sbjct 41663 CGCGAGTCGCACCACTTGAGCGCCCAGTGGGCCTTCTTCTGCACACAAGGGATCGTCTCG 41604 Query 133126 ATGGCGTTCAACAAACGGAGTTTCTCTTCCGA--GGAACGC-ACGTAGGTGTCGATGAGG 133182 |||||| || || || | |||| || | || | | ||| ||||||||||| Sbjct 41603 ATGGCGCG-AAGAA--GGTGGTTCTTCTCGGTCTGGTCCTTGATGTACGTGTCGATGAGC 41547 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGC 133242 ||| |||| |||||||| | |||||| || || || || |||||||| ||||| ||| Sbjct 41546 AGCGAGTACACCTCCGAGTGGATGTTCTCAATCGCAATCTGGAAGCCGTAGAAGCAACGC 41487 Query 133243 GCCTCGACCACCTGCACTTCTTGAGCGAAACGC--TCGACCAGATTTTCGTTGACGATGC 133300 ||||| |||||||| || || ||| ||| | || || ||||||||||||| Sbjct 41486 GCCTCAGGAACCTGCACCTCGCT-GCTAAAGTTCATCG-CGAGGTTCTCGTTGACGATGC 41429 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 | || ||||| ||||| || || |||||||||||||| || | |||||||||||| | | Sbjct 41428 CATCACTGGCCGCGAAGAACGCGAGCACGTGCTTGATAAAGTAGCGCTCGTTGTCCGTGA 41369 Query 133361 AGCGCTCCCAGTCGCGCGTGTCCTTGGAC-AGGTCCACCTCCTCGACGGTCCAAAACGAC 133419 | | |||||| | | | | || || ||||| | ||| || | ||||| || | Sbjct 41368 GGTTGTTCCAGTC-CTTGAGGTCGTGCACGAGGTCAATCTCTTCAGCCGTCCAGAAGCTC 41310 Query 133420 GCCTCGGCTTTTTTGTACAT 133439 ||||| || || |||||||| Sbjct 41309 GCCTCAGCCTTCTTGTACAT 41290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500103501058560