Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq217 183 4e-41 seq45 149 8e-31 >seq217 Length=20966 Score = 183 bits (202), Expect = 4e-41 Identities = 494/745 (66%), Gaps = 13/745 (2%) Strand=Plus/Minus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| ||| | ||| | |||| ||||| |||| ||||| | | || || || | | Sbjct 18430 CCCGCAGCAGATGATTCTGCGCGTCGCTGTCGGCATCCACAAGCATGACATCGACGCCGC 18371 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||||| | ||||| | | | |||| ||||| || || || || || Sbjct 18370 GCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTCACGCACGCGACGCCGACGCTGTT 18311 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 |||||| || || || | || || |||| || ||||| | || | ||||| || Sbjct 18310 CAACGCCGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGCTCGCCATGAAGGACGA 18251 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || ||| | ||||| || | ||| |||| | || ||| ||||| |||||||| || Sbjct 18250 CTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCCTGCATCTCCAAGTGGGCCGG 18191 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 || || || | | | || | || | || | ||| |||||| | | || || Sbjct 18190 CGGCATTGGTGTCAGCGTGCACAACATCCGCGCGACCAA--CTCGTACATCCGTGGCACG 18133 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || || | || | | || ||||| ||||| || |||| ||| ||||| ||| Sbjct 18132 AACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTGTTCAACGACACGGCGCGTTAT 18073 Query 111969 GTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 || | || | ||| | |||||||| || |||| | ||||| ||||| |||||| Sbjct 18072 GTGGATCAGGGTGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTATCTCGAGCCGTGGCAC 18013 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 || || ||| | |||||||| || | ||||| || | ||| | | | | || Sbjct 18012 GCCGACATCTTCGAGTTCCTCGACCTCAAGAAGAACCACGGCAACGAGCTG-CACCGCGC 17954 Query 112086 -CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 || ||||| |||| ||| | |||||||| ||||||||||||||| | ||||||| | Sbjct 17953 TCGTGATCTGTTCTACGCGATGTGGATTCCCGATCTCTTCATGAAGCGCGTTGAGGCCAA 17894 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT-GGGTG 112203 ||| | ||| || || || || || ||||||| ||||||| | | | ||| ||||| Sbjct 17893 CGGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCACCGGGTCTCTAC-ACGACGTGGGGTG 17835 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGC 112263 | ||||| || || || ||| |||||||| || | || ||| |||| | | Sbjct 17834 ACGAGTTCGAGGCGCTGTACCACCAGTACGAGCGCGAGGGCCGCGCGCGCAAGACGATCC 17775 Query 112264 CAGCTGCCG-ATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 || || | | | ||| || || ||| |||| || | |||||| || || || || Sbjct 17774 GCGC-GCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGACGGGCACGCCGTAC 17716 Query 112323 ATGCTTTACAAAGACGCCTGTAACC 112347 ||||| ||||| ||| | ||||||| Sbjct 17715 ATGCTGTACAAGGACTCGTGTAACC 17691 >seq45 Length=43062 Score = 149 bits (164), Expect = 8e-31 Identities = 199/274 (73%), Gaps = 2/274 (1%) Strand=Plus/Plus Query 102048 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 102107 ||||| |||| ||| || ||||| | |||||||| || || || |||||| | Sbjct 41548 CTCATCGACACGTACATCAAGGACCAGACCGAGAAGAACCACCTTCTTCGCGCCATCGAG 41607 Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 102167 || | || ||| | || ||||| || | ||||| | ||||||| || | | || Sbjct 41608 ACGATCCCTTGTGTGCAGAAGAAGGCCCACTGGGCGCTCAAGTGGTGCGACTCGC-GCCG 41666 Query 102168 CGTTCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 || | || || ||||| || |||| || || || ||||| ||||||||||| || Sbjct 41667 CGCCGCGTTCGCCGAGCGTATCGTCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGG 41726 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 || |||||| |||| | |||||||||||||| || || ||||| || ||| ||||||| Sbjct 41727 CTCGTTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGCCTCAGCTTCTC 41786 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| ||||| ||||||||||| |||||| Sbjct 41787 GAACGAGCTCATCTCGCGTGACGAGGGTCTCCAC 41820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620656396140480