Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq217 205 1e-47 seq45 143 3e-29 seq440 87.8 2e-12 >seq217 Length=20966 Score = 205 bits (226), Expect = 1e-47 Identities = 574/866 (66%), Gaps = 25/866 (3%) Strand=Plus/Minus Query 75128 CGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 75187 || |||| ||| | | |||||||| |||| || || |||||| || || | || Sbjct 18513 CGCGACTTTGAGTACGACTACTTTGGCTTCAAGACGCTCGAGAAGTCGTACCTCCTGCGC 18454 Query 75188 CTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATC 75247 ||| ||||| || || ||| ||| | ||| | |||| ||||| |||||||| Sbjct 18453 GTCGGTGGCAAGGTCGCTGAGCGCCCGCAGCAGATGATTCTGCGCGTCGCTGTCGGCATC 18394 Query 75248 CACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTC 75307 ||| | | ||||| || | | | ||||| ||||| | ||||| ||| | | ||| Sbjct 18393 CACAAGCATGACATCGACGCCGCGCTCGAGACGTACGAGTACATGTCGCAAAGCTTCTTC 18334 Query 75308 ATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGC 75367 | ||||| || || || || ||||| || || || || | |||||| |||| ||| Sbjct 18333 ACGCACGCGACGCCGACGCTGTTCAACGCCGGCACGCCGCGCCCGCAGCTGTCGTCGTGC 18274 Query 75368 TTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGT 75427 ||||| |||||| ||||| ||||| ||| | || ||||||| || || | | |||| Sbjct 18273 TTCCTGCTCGCCATGAAGGACGACTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGC 18214 Query 75428 GCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAAT 75487 || ||||| |||||||| || || ||||| | | | || | | | || | Sbjct 18213 GCCTGCATCTCCAAGTGGGCCGGCGGCATTGGTGTCAGCGTGCACAACATCCGCGCGACC 18154 Query 75488 AAATCTCGT--ATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCG 75545 || ||||| || || || || || || || | || | | || ||||| |||| Sbjct 18153 AA--CTCGTACATCCGTGGCACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCG 18096 Query 75546 TATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG----TCGCAAGGGGTCCATC 75601 | || |||| ||| ||||| ||||| ||| || | |||| |||||||| || || Sbjct 18095 TGTTCAACGACACGGCGCGTTATGTGGATC-AGGGTGGCGGCAAGCGCAAGGGCTCGTTC 18037 Query 75602 GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGA-GTTACGACTCAA 75660 ||| | || | || || ||||| ||||| ||| | |||||||| || | | || || Sbjct 18036 GCGATGTATCTCGAGCCGTGGCACGCCGACATCTTCGAGTTCCTCGACCTCAAGA-AGAA 17978 Query 75661 CCAAGGTGACGAAGAGGCTCGGTG-TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACC 75719 ||| || ||| || || | | | | | ||||| || | | |||||||||| || | Sbjct 17977 CCACGGCAACG-AGCTGCACCGCGCTCGTGATCTGTTCTACGCGATGTGGATTCCCGATC 17919 Query 75720 TTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCAC 75779 | ||||||||||| ||||||| || | ||| || ||||| || || |||||| Sbjct 17918 TCTTCATGAAGCGCGTTGAGGCCAACGGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCAC 17859 Query 75780 CAGGTCTCTCCGACG-CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG 75838 | ||||||| | ||| || |||||| ||||| || || || ||| |||| || Sbjct 17858 CGGGTCTCTAC-ACGACGTGGGGTGACGAGTTCGAGGCGCTGTACCACCAGTACGAGCGC 17800 Query 75839 GAGGGTAGAGC---CAATGCGA-CTGTAC-CAGCCGCCGATGTTTGGAAGGCTATTCTCA 75893 ||||| | || ||| ||| | | | |||| || | ||| || || ||| Sbjct 17799 GAGGGCCGCGCGCGCAAGACGATCCGCGCGCAGCAGC-----TCTGGTTCGCGATCCTCG 17745 Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953 | || |||| ||||| || || || || ||||| |||||||| | |||||| ||| Sbjct 17744 AGTCGCAGATCGAGACGGGCACGCCGTACATGCTGTACAAGGACTCGTGTAACCGCAAGT 17685 Query 75954 GTAACCAAAAGAATTTGGGAACAATC 75979 ||||| |||| | || || ||| Sbjct 17684 CGAACCAGCAGAACCTCGGCACGATC 17659 >seq45 Length=43062 Score = 143 bits (158), Expect = 3e-29 Identities = 385/578 (67%), Gaps = 18/578 (3%) Strand=Plus/Plus Query 64948 ATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACT 65007 || |||| ||||| ||||| | || ||||| || | || |||||| | || Sbjct 41551 ATCGACACGTACATCAAGGACCAGACCGAGAAGAACCACCTTCTTCGCGCCATCGAGACG 41610 Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGC 65067 | || ||| | |||||||||| | ||||| | || |||| ||| | | | ||| Sbjct 41611 ATCCCTTGTGTGCAGAAGAAGGCCCACTGGGCGCTCAAGTGGTGCGACTCGC-GCCGCGC 41669 Query 65068 TCC-TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 | ||||||||||| | | ||||| || || ||||| ||||||||||| || || Sbjct 41670 CGCGTTCGCCGAGCGTATCGTCGCGTTCGCTGCCGTCGAGGGCATCTTCTTCTCGGGCTC 41729 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 |||||| |||| | ||| | |||||||| || || ||||| ||||| ||||||| || Sbjct 41730 GTTCTGCTCTATCTTCTGGCTCAAGAAGCGCGGCCTTATGCCTGGCCTCAGCTTCTCGAA 41789 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC---CGTGGAGCTCTTCAA 65243 || || || || || || |||||||||||| || || || | || | || ||| Sbjct 41790 CGAGCTCATCTCGCGTGACGAGGGTCTCCACTGCGACTTCGCGTGCCTGCTGTACTCCAA 41849 Query 65244 GACTTTGCGTAATAGACCCACTACCGAAACT---ATCCACGCCATCGTGAAAGAGGCGGT 65300 | | || | || || | || || ||||||| ||| | || || || Sbjct 41850 G--CTCGCCAACAAGCTCC----CTGAGTCTCGCATCCACGAGATCATTCGCGATGCCGT 41903 Query 65301 TGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTC 65360 | ||| ||||| | |||| || |||| | ||||| | ||||||||||||||||| Sbjct 41904 CGCGATCGAGAAGGAGTTCGTCCAGGACTCGCTCCCGGTGGAGCTCATCGGTATGAACTC 41963 Query 65361 TGAGAAGATGTCCGAGTACATTGAGTATGTG-TCGGATCGTCTCCTCAAACAAGTTGG-G 65418 |||| | |||||||||||| | || | ||||| |||||| | |||| | Sbjct 41964 GTCTCTCATGTGCCAGTACATTGAGT-TCTGCGCCGATCGCCTCCTCCACGCGCTTGGCG 42022 Query 65419 GTGCCACCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGAT 65478 ||||| || | || | | ||| || ||||||| ||||| | || || | Sbjct 42023 TTGCCA-AGATCTACAAGGTGTCGAACCCGTTTGACTGGATGGACATGATCTCGCTCCAG 42081 Query 65479 GGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 || |||||||||||||| |||||||| || || || || Sbjct 42082 GGCAAGACCAACTTCTTCGAGAAGCGCGTGGGCGAGTA 42119 >seq440 Length=14964 Score = 87.8 bits (96), Expect = 2e-12 Identities = 246/372 (66%), Gaps = 18/372 (5%) Strand=Plus/Plus Query 14421 AGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCGCGGACAAGTCTGCGTACCACC 14480 || ||||||| ||||| || || || | | ||| || | || | ||||||||||||| Sbjct 2564 AGAATGAAATTAAGGTTGCTCAGCTTGGTGGATACGTGTCCGAGCATTCTGCGTACCACC 2623 Query 14481 ATGGTGAAGT-ATCCTTAGCGGACACGATTGTTAAGTTGGCAAACGACTACACGGGTTCA 14539 | |||||| | || | ||| ||||||| | || |||| | || | ||| Sbjct 2624 ACGGTGAACAGAGTCTCAACGG-CACGATTATCAACATGGCCCAAGATTTTGTGGGAAGC 2682 Query 14540 AACAACATTAACCT----TCTTGAACCGTGTGGTCAATTTGGTACGCGTCTCATGGGTGG 14595 |||||||| | || ||| || || |||| |||||||| || || |||||| Sbjct 2683 AACAACATCCATCTGTTGTCTCCAAACG----GTCAGTTTGGTACTCGACTAGCGGGTGG 2738 Query 14596 TAAGGATGCTTCTCAGACGAGGTACATTTTCACAAAACTTACCAAGGAGGCTCGCAAGA- 14654 ||| ||||| | | | | ||||| || || || || | || | ||| || || Sbjct 2739 TAAAGATGCAGCATCGCCTCGTTACATCTTTACGAACCT---CGAGCAA-CTCACACGAC 2794 Query 14655 ---TCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGATGATGGACGCTCCA 14711 |||| || |||| |||| || | | | | || | ||||||||||||| || | Sbjct 2795 GCATCTTCGACCCTCTGGATAACGACAACTTGACATATCTCGACGATGATGGACAGTCGA 2854 Query 14712 TTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAATGGAACCGAGGGTA 14771 |||| || || | || | || | | ||||||| ||||| ||||| |||||||| Sbjct 2855 TTGAGCCTGAATGGTATGTTCCGATCATTCCAATGGCACTCGTCAATGGTGGCGAGGGTA 2914 Query 14772 TCGGTACGGGTT 14783 |||| ||||||| Sbjct 2915 TCGGCACGGGTT 2926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596486945281920